From www.bloodjournal.org by guest on February 6, 2015. For personal use only. TEL Gene Is Involved in Myelodysplastic Syndromes With Either the Typical t(5;12)(q33;pl3) Translocation or its Variant t(10;12)(q24;p13) By I. Wlodarska, C. Mecucci, P. Marynen, C. Guo, D. Franckx, R. La Starza, A. Aventin, A. Bosly, M.F. Martelli, J.J. Cassiman, and H. Van den Berghe A t(5;12)(q33;p13) translocation is a recurrent chromosome abnormality in a subgroup of myeloid malignancies with features of both myeloproliferative disorders and myelodysplastic syndromes (MDSs). Themolecular consequence of a t(5;12) is a fusion betweenthe platelet-derived growth factor receptor-B gene on chromosome 5 and a novel ETS-like gene, TEL. on chromosome 12. We report onthree patients with a t(5;12)(q33;p13) diagnosed as chronic myelomonocytic leukemia, and one case of a t(10;12)(q24;p13) in a progressive MDS, with eosinophilia and monocytosis. Involvement of the TEL gene in these chromosome translocations was investigated by fluorescence in situ hybridization (FISH) with cosmid probes containing selectively the 5’ end or 3‘ end of TEL. Hybridization of these cosmids t o a der(5)/ der(l0) or a der(l2). respectively, demonstrated a rearrangement of TEL in both translocations, showing that the t(10;12) is a variant translocation of the t(5;12). Cloning of the fusion cDNA of one case of t(5;12) showed that the breakpoint occurred at the RNA level at exactly the same position as reported by Golub et al (Cell 77:307,1994). In addition, the TEL gene on chromosome 12 could be localized between two probes previously mapped to 12~13,namely PRBl and D12S178, leading t o a better definition of the position of TEL in this chromosome region. Moreover, in the case involving chromosome 10, the breakpoint occurred between cKTN206 and cKTN312/LYT-10 at 10q24. Clinicohematological data in these studies as well as the restrictionmapping of chromosomal breakpoints strongly suggest that (1)common features in MDSs involving the TEL gene are monocytosis and eosinophilia, (2) chromosomes other than no. 5 may be involved and at least a t(10;12)(q24;p13) variant chromosome translocation does exist in these MDSs, and (3) both standard and variant 12p/TEL translocations may be identified byFISH with appropriate probes. 0 1995 by The American Society of Hematology. C We report herethree patients with a typical t(5;12) (q33;p13) diagnosed as CMML according to the FrenchAmerican-British criteria and one case of refractory anemia (RA) with eosinophilia in the bone marrow (BM) and increasing monocytosis, associated with what appeared to be a variant t( 10;12)(q24;p13) translocation. We investigated the TEL gene in both types of translocations with Southern blotting and fluorescence in situ hybridization (FISH) analysis with cosmids specific for the 5’ end and the 3’ end of the TEL gene. Moreover, 1Oq was further analyzed with a panel of probes to better localize the breakpoint on 10q24. LASSIFICATION OF myeloid leukemias thatshow features of both myeloproliferative and myelodysplastic disorders have been the subject of intensive discussion over the past few years.’” However, within this group of disorders, cytogenetic analysis showed at least one recurrent translocation, ie, a t(5;12)(q33;p13), among malignancies classified as Ph-negative chronic myeloid leukemia, myelodysplastic syndrome (MDS), atypical chronic myelomonocytic leukemia (CMML), or chronic myeloproliferative disThis t(5;12) translocation, which has been recently characterized at the molecular level, involves the plateletderived growth factor receptor-B (PDGFRB) gene at 5q33 and the TEL gene at 1 2 ~ 1 3which , is a novel member of the ETS family.” The translocation results in expression of a fusion transcript linking the 5’ helix-loop-helix (HLH) domain of the TEL gene to the transmembrane and tyrosine kinase domains of PDGFRB. From the Center for Human Genetics, University of Leuven, and Department of Hematology, University of Louvain, Mont-Godinne, Belgium; Institute of Hematology, University of Perugia, Italy; and Department of Hematology, Hospital deSant Pau, Barcelona, Spain. Submitted September 27, 1994; accepted January 3, 1995. C.M. partially supported by Associazione Italiana per la Ricerca sul Cancro. Dedicated to Kazimierz Dux, MD, PhD, on the occasion of his 80th birthday. This text presents research results of the Belgian programme on Interuniversity Poles of Attraction initiated by the Belgian State, Prime Minister’s Ofice, Science Policy Programming.The scient$c responsibility is assumed by its authors. Address reprint requests to H . Van den Berghe, Centerfor Human Genetics, Herestraat 49, B-3000 Leuven, Belgium. in part by page The publication costs of this article were defrayed chargepayment. This article must thereforebeherebymarked “advertisement” in accordclnce with 18 U.S.C. section 1734 solely to indicate this fact. 0 1995 by The American Society of Hematology. 0006-4971/95/8510-0027$3.00/0 2848 MATERIALS AND METHODS Patients. The four patients involved in this study were collected from three centers: Centre for Human Genetics (Leuven, Belgium), case no. 1; Hospital de Sant Pau (Barcelona, Spain), case no. 2; and the Institute of Hematology (Perugia, Italy), cases no. 3 and 4.Clinical and hematologic findings are summarized in Table 1. Cytogenetics. Cytogenetic analyses from peripheral blood (PB) and BM were performed after 3 days using synchronized cultures without stimulation. R- andor G-chromosome banding was used. Karyotypes are presented in accordance with ISCN.14 DNAanalysis. The TEL cDNA wasamplified from a liver cDNA sample using a 5’-CTCCAGAGAGCCCAGTGCCGAGT oligonucleotide as forward primer and a 5‘-TCCAGACGGTCTCGGCCACT oligonucleotide as reverse primer. The resulting 1.241-bp cDNA that contains the complete coding sequence of TEL was cloned into pGEM-3Z and was sequenced. DNA was isolated from BM samples of patients no. 3 and 4 with conventional methods. DNA (15pg) was digested with EcoRI or Pst I, separated on an agarose gel, blotted onto a nylon membrane, and probed with the complete TEL cDNA. Cosmids were isolated from the Lawrence Livermore (Livermore. CA) chromosome 12 library LL12NCO1 with the TEL cDNA as a probe. High-density filters of the library were kindly grown byDr E. Schoenmakers ( Department of Molecular Oncology, Center for Human Genetics). Ten cosmids were isolated. Southern analysis of the cosmids was performed with four fragments of the TEL cDNA ranging from bp 79 to 371, bp 372 to 678, bp 679 to 1038, and bp 1039-1329 (numbering according to Golub et all3) and generated Blood, Vol 85,No 10 (May 15). 1995: pp 2848-2852 From www.bloodjournal.org by guest on February 6, 2015. For personal use only. INVOLVEMENT OF TEL INMDS WITH ~ ( 5 ; 1 2 )OR ~(10;12) with Xmn I, Sac I, and Acc I, respectively. Two cosmids were selected for further analysis, LL12NCOlN50F4 (cTEL5') and LL12NCOlN148B6 (cTEL3'). Cycle sequencing using fluorescein isothiocyanate end-labeled primers derived from the TEL cDNA sequence and a commercially available sequencing kit (BRL, Gaithersburg, MD) on an automated laser fluorescence (ALF) sequencer (Pharmacia, Uppsala, Sweden) confirmed the identity of the cosmids. In situ hybridization was performed as previously de~cribed.'~ Probes cKTN206, cKTN420, and cKTN312 were kindly provided by Dr J. Nishisho (Osaka University Medical School, Yamadaoka, Japan); the LYT-10-specific probe PMd 1OPOO1, by Dr U.H.Weier (University of California, Berkeley, CA); and D12S119, by Dr K. Montgomery (AECOM, New York, NY). All other 12p cosmids were isolated and ordered by FISH in OUT laboratory.16 FISH experiments were evaluated on a Zeiss Axioplan fluorescence microscope (Zeiss, Oberkochen, Germany) and a Leitz DMRB (LDMRB) fluorescence microscope (E. Leitz Inc, Wetzlor, Germany) equipped with a cooled CCD camera (Photometrics, Stuttgart, Germany) run by Imagenetics software (Imagenetics, Stuttgart, Germany). Eight to twenty-five informative chromosome spreads were analyzed for each experiment. RNA analysis. Total RNA was isolated from BM cells of patient no. 3 by the guanidiniudacid phenol method. Total RNA (5pg) was used for the synthesis of first-strand cDNA, primed with oligo(dT), using Moloney murine leukemia virus reverse transcriptase (GIBCOBRL) in a volume of 20 pL. Five microliters of the reaction was used for polymerase chain reaction (PCR) analysis. The TEW PDGFRB fusion cDNA was amplified by nested PCR. For the TEL gene the primers were 5'-CCTCCAGAGAGCCCAGTGCCGAGT and 5'-TCAGGATGGAGGAAGACTCGA. For the PDGFRB gene the primers described by Golub et a l l 3 were used. The PCR products were cloned into Sm-I-digested pUC18, and 5 clones were sequenced on an automated sequencer (ALF; Pharmacia, Uppsala, Sweden). I RESULTS d -c s U) E 0 N i a c U) S E l 2 Nature of the disease. Based on clinical and laboratory findings (splenomegaly, monocytosis, eosinophilia, and absence of Ph chromosome and breakpoint cluster region rearrangement), three of the four cases (no. 1 to 3) presented were diagnosed as CMML. The fourth case presented as MDS with pancytopenia and only 2% of blasts in the BM (RA). However, an increasing number of monocytes (20%) was detected in the PB 20 months after diagnosis, when blast cells increased to 25%. BM eosinophilia was also present from the beginning. Cytogenetics. Cytogenetic analysis was performed at the time of diagnosis in three cases (no. 2 to 4) and 2 years after the first observation in patient no. 1. The t(5;12)(q33;p13) was found as the sole structural abnormality in two patients; one of them also had a t(5;12)-positive subclone with trisomy 21 (case no. 1). The karyotype from the third patient showed a more complex rearrangement concerning chromosomes 6 and 16, in addition to the t(5;12). The fourth case was characterized by at(10;12)(q24;p13) as the sole chromosomal aberration detected in two consecutive BM samples, analyzed at the time of RA and 2 years later, when evolution of the disease to a CMML-like disorder was observed. DNA and RNA analysis. The involvement of the TEL gene in the t(5;12) and t(10;12) was studied by Southern analysis and FISH with cosmids containing the 5' end or the 3' end of the TEL gene. To isolate these probes a TEL cDNA From www.bloodjournal.org by guest on February 6, 2015. For personal use only. 1 2850 was obtained by reverse transcription PCR and was cloned. A 1,241-bp TEL cDNA was obtained containing the complete coding sequence. The sequence of this cDNA was identical to the published one.I3 The cDNA was used to screen a chromosome 12 cosmid library. Ten cosmids were obtained and characterized by Southern hybridization with restriction fragments of the TEL cDNA. Two cosmids were selected for further analysis. Clone cTEL5’ yielded a hybridization signal at high stringency, with a cDNA fragment spanning bp 79 to371 of the TEL sequence but yielded no signal with any TEL probe derived downstream from bp 372 (results not shown). Direct sequencing showed that cTEL5‘ contained a TEL exon which ends at bp 187 of the TEL cDNA sequence, and no sequence derived downstream from this exon. Thus, cosmid TEL5‘ contains no sequences derived downstream from the breakpoint in the t(5;12) case published by Golub et al.I3 On the other hand, cosmid cTEL3’ showed a positive signal with a probe derived from bp 1,039 to 1,329 of the TEL cDNA and no signals with any probe derived upstream from bp 1,039 (results not shown). Therefore, this probe contains no sequences derived upstream from the published breakpoint in TEL. Several cosmids containing TEL sequences between bp I87 and 1,039 were isolated. Because these cosmids showed no overlap with either cTEL5’ or cTEL3‘ and because they contain inserts of approximately 40 kb, the genomic sequence between both cosmids must be at least 40 kb. Southern hybridizations of genomic DNA isolated from a BM sample of patients no. 3 and 4 and digested with EcoRI and Pst I with the TEL cDNA did not show any rearranged fragments. FISH with cosmid probes hybridizing to the chromosome region 12p was performed on leukemic cells from all patients. Patient no. 4 was further investigated with cosmids covering 10q22.1 to 10q25.1 (Fig 1). FISH with TELspecific cosmids showed that cTEL3’ was present on the normal chromosome 12p and the der( 12) all in analyzed cases and was absent on the der(5) (patients no. 1 through 3) or the der(l0) (patient no. 4). The reverse was observed with probe cTEL5’. Signals were present on the normal chromosome 12p and the der(5) for patients no. 1 through 3 or the der(l0) for patient no. 4, but never on the der(l2) (Fig 2). Among the other 12p cosmids used, von Willebrand factor and PRBl hybridized to the der(5)t(5;12), whereas hybridization signals from the KRAS2, D12S 1 19, and D12S178 were foundon theder(12)t(5;12). Forchromosome 10, two cosmids cKTN420 (lOq22.1) and cKTN206 (10q22.3-q23.1)mapped proximal to the breakpoint. The third probe, cKTN312 previously assigned by FISH to lOq24.3-q25.1, as well as a probe for LYT- 10 mapped distal to the breakpoint. A fusion transcript of TEL and PDGFRB could be amplified from cDNA of patient no. 3 for which an RNA sample was available. Sequencing of the resulting cDNA showed that in this case the fusion occurred at the RNA level at exactly the same position as reported by Golub et all3 for their t(5;12) case. DISCUSSION We showed TEL gene involvement in four cases of MDSs characterized by a t(5;12)(q33;p13) or a variant t( 10;12) A L W TEW- q 3 der151 3 WLODARSKA ET AL p13 -1 TEW’ D12S178 D12S119 KRAS2 der(l2) B CKTN 312/LyT-10 D12S178 D12S119 KRAS2 cKTN 420 cKTN 206 TEW PRBl VWF U der110) der112) t(IO; 12)(q24;pl3) Fig 1. Graphical presentation of (A) t(5;12) and (B)t(10;12) translocations. Probes used in FISH experiments and their positions in relation to breakpoints on chromosome 5, 10, and l 2 are indicated. (q24;p13). In three cases diagnosis was compatible with CMML, whereas the fourth case with the cytogenetic variant t(10;12) had a RA,which later evolved to a CMML-like disorder with eosinophilia and monocytosis. The 5;12 translocation was described for the first time by Keene et al’ in two patients characterized by eosinophilia and 12p abnormalities, diagnosed as eosinophilic leukemia and Ph-negative CML. An additional case was reported by Srivastava et a19 in which CMML was characterized by overexpression of the KRAS2 oncogene, assigned to 1 2 ~ 1 2Six . other cases of atypical CML, CMML with eosinophilia or myeloproliferative disorder with dyserythropoiesis and eosinophilia, and t(5;12) have been published by Berkowicz et al,”’ Martiat et a1: Wessels et and Baranger et al.” It waspostulated that the translocation represents a clinical entity with features of both CML and CMML” and eosinophilia.” However, an additional observation was published by Lerzaet all’ as a From www.bloodjournal.org by guest on February 6, 2015. For personal use only. INVOLVEMENT OF TEL IN MDS WITH ~(5;12)OR T(10;12) 2851 t(5;12) r' 4 L '4 'r" Fig 2. FISH with coomids specific for the 5' end (cTEL5') and the 3' end (cTEL3') of TEL gene performed in t(5;121andt(10;12)cases. Chromosome 12 anda der(12) are indicatedby arrows; a der(5) and der(10) are indicated by arrowheads. The t(5;12) was recently cloned by Golub et al." The investicase of RA with monocytosis and fibrosis. Altogether, data gators showed that the translocation results in expression of a from the literature, from our patients no. 1, 2, and 3, and fusion transcript between a novel gene at 12~13,called TEL the clinical evolution of case no. 4 allow us to conclude that (for translocation,ets, leukemia), whichis a member of theETS themalignantdisorderassociatedwithastructuralrearrangement on 12p13/TEL gene is characterized by a high family, and the PDGFRBgeneat5q33.TheTELPDGFRB number of monocytes (more than 8% of the differential count fusion includes the 5' HLH domain of TEL and the transmembrane and tyrosine kinase domains of PDGFRB. Themechanism in PB) and BM eosinophilia (more than 5% in BM) and is consistent with diagnosis of CMML in the majority of cases. of transformation by the TELPDGFRB fusion is not known. Cytogenetically the 1 2 ~ 1 3involvement is usually because However, it is of interest that the recipmcal fusion transcript of a 5;12 translocation. Moreover,for the first time a cytoge-containing the TEL, DNA-binding domain is not expressed in leukemic cells; thmfore, the chimeric gene shows mainly the netic variant t(10;12)(q%;p13) translocation is shown. From www.bloodjournal.org by guest on February 6, 2015. For personal use only. WLODARSKA ET AL 2852 some-negative chronic myelogenous leukemia and chronic myelooncogenic potential of PDGFW3. Our experiments with a TEL monocytic leukemia. Hematol Oncol Clin North Am 4:389, 1990 cDNA p b e could not show a rearrangementon Southern blot4. Martiat P, Michaux JL, Rodhain J: Philadelphia-Negative ting. Indeed,although Golubet all3mentioned detection of TEL (Ph-) chronic myeloid leukemia (CML): Comparison with Ph+ CML rearrangement by Southern blotting and ribonuclease assays, it and chronic myelomonocytic leukemia. Blood 78:205, 1991 is not clear whether they used genomic or cDNA p b e s for 5. Mecucci C, Van den Berghe H: Cytogenetics, in Koeffler HP the former analysis. Our results suggest that the brealrpoint on (ed): Myelodysplastic Syndromes. Philadelphia, PA, Saunders, 1992, chromosome 12 may occur in an intron sequence of the TEL p 523 6. Michaux JL, Martiat Ph: Chronic myelomonocytic leukaemia gene not detected by the applied combination of restriction en(CMML) - A myelodysplastic or myeloproliferative syndrome? Leuk zymes and the "EL cDNA. The large genomicsize of the "EL gene supportsthis hypothesis. In case no. 3, however, sequencingLymphoma 9:35, 1993 7. Dickstein JI, Vardiman JW: Issues in the pathology and diagof the fusion cDNA showedthat exactly the samefragments of nosis of the chronic myeloproliferative disorders and the myelodysthe TEL and PDGFRE3 genes were fusedas described by Golub plastic syndromes. Hematol Path01 99:513, 1993 et al,13 further supporting the hypothesis that in these cases the 8. Keene P, Mendelow B, Pinto MR, Bezwoda W, MacDougall HLH domain of TEL might be of functional importance. L, Falkson G, Ruff P, Bernstein R: Abnormalities of chromosome 1 2 ~ 1 and 3 malignant proliferation of eosinophils: a nonrandom assoThe FISH investigations in this study and the cDNA analysis ciation. Br J Haematol 67:25, 1987 of one case definitelyp v e d that thebmkpints in both t(5;12) 9. Srivastava A, Boswell HS, Heerema NA, Nahreini P, Lauer and t(10;12) occurred within the TEL gene. Indeed, the 3' end RC, Antony AC, Hoffman R, Tricot G: KRAS2 oncogene overexof the TEL gene is maintained on the d e ~ l 2 )chromosome, pression in myelodysplastic syndrome with translocation 5;12. Canwhereas the 5' end of E L is translocated to the der(5) or the cer Genet Cytogenet 35:61, 1988 der(l0) in both the t(5;12) and the t(10;12) cases, respectively 10. Berkowicz M, Rosner E, Rechavi G, Mamon Z, Neuman Y, (Fig 2). 'Ihus, hematologic features, karyotypic results, and moBen-Bassat I, Ramot B: Atypical chronic myelomonocytic leukemia with eosinophilia and translocation (5;12). A new association? Canlecular data are in keeping with the definition of 1012 translocation as a variantof t(5; 12). The involvement of another hypotheti- cer Genet Cytogenet 51:277, 1991 11. Lerza R, Castello G, Sessarego M, Cavallini D, Pannacciulli calgenewithin an intron of TEL inthe case with t(1012) I: Myelodysplastic syndrome associated with increased bone marrow appears to be extremely unlikely. These results also show the fibrosis and translocation (5;12)(q33;p12.3). Br J Haematol 82:476, usefulness of isolated TEL cosmids as p b e s for the analysis 1992 of the involvement of TEL gene in MDS. In addition, data are 12. Baranger L, Szapiro N, Gardais J, Hillon J, Derre J, Francois CoIlSistent with apte1-5'TEG3'TEknt orientation for the TEL S, Blanchet 0, Boasson M, Berger R: Translocation t(5;12)(q3133;p12-p13): A non random translocation associated with a myeloid geneonchromosome12andaqter-SPDGFW3-3'PDGFRBdisorder with eosinophilia. Br J Haematol 88:343, 1994 cent orientation for the FDGFRB gene on chromosome 5 . 13. Golub TR, Barker GF, Lovett M, Gilliland G: Fusionof PDGF Further analysis of the t(5;12) and a t(lQ12) with a panel of receptor p to a novel ets-like gene, rel, in chronicmyelomonocytic 12pspecific cosmids allowed us to determine the positionof the leukemia with t(5;12) chromosomal translocation. Cell 77:307, 1994 brealrpoint, as well as of the TEL gene, between D12S178 and 14. Mitelman F (4):ISCN: Guidelines for Cancer Cytogenetics, P M 1 lociat 12~13.Withrespect to chromosome10, FISH Supplement to an International System for Human Genetic Nomenanalysis showed that the breakpoint occurred in a region flanked clature. Basel, Switzerland, Karger, 1991 15. Wlodarska I, Mecucci C, Vandenberghe E, De Wolf-Peeters bycKTN206and cKTN312LYT-10at 1Oq24.Althoughthe lOq24 chromosome region carries some genes that may play an C, Thomas J, Hilliker C, Schoenmakers E, Stul M, Marynen P, important role in leukemogenesis and lymphomagenesis (namely Cassiman JJ, Van den Berghe H Dup(l2)(ql3"qter) in two t(14;18)negative follicular B-non-Hodgkin's lymphomas. Genes ChroTcL3 (HOXlI),'* LYT-lO,I9 and APO-liFASZo), no recurrent mosom Cancer 4:302, 1992 associations of 1Oq24 chromosomal abnormalities with myeloid 16. Chaffanet M, Baens M, Aerssens J, Schoenmakers E, Cassidisorders have been reported before. man JJ, Marynen P: Mapping of an ordered set of 14 cosmids to human chromosome 12p by two-color in situ hybridization. CytoIn summary, the findings discussed here show that the TEL genet Cell Genet 69:27, 1995 gene may be activated not only by fusion with the PDGFRE3 17. Wessels J W , Fibbe WE, van der Keur D, Landegent JE, van gene on chromosome 5q33.1, but also by unknown sequences der Plas DC, den Ottolander GJ, Roozendaal KJ, Beverstock GC: on 1Oq24, located upstreamto LYT-10. Involvement of theTEL t(5;12)(q31;p12). A clinical entity with features of bothmyeloid in pathogenesis of h4DS may be easily analyzed by FlSH with leukemia and chronic myelomonocytic leukemia. Cancer Genet Cycosmids containing the 5' end and 3' end of TEL. togenet 65:7, 1993 REFERENCES 1. 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For personal use only. 1995 85: 2848-2852 TEL gene is involved in myelodysplastic syndromes with either the typical t(5;12)(q33;p13) translocation or its variant t(10;12)(q24;p13) I Wlodarska, C Mecucci, P Marynen, C Guo, D Franckx, R La Starza, A Aventin, A Bosly, MF Martelli and JJ Cassiman Updated information and services can be found at: http://www.bloodjournal.org/content/85/10/2848.full.html Articles on similar topics can be found in the following Blood collections Information about reproducing this article in parts or in its entirety may be found online at: http://www.bloodjournal.org/site/misc/rights.xhtml#repub_requests Information about ordering reprints may be found online at: http://www.bloodjournal.org/site/misc/rights.xhtml#reprints Information about subscriptions and ASH membership may be found online at: http://www.bloodjournal.org/site/subscriptions/index.xhtml Blood (print ISSN 0006-4971, online ISSN 1528-0020), is published weekly by the American Society of Hematology, 2021 L St, NW, Suite 900, Washington DC 20036. 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