Characterization of the Monocyte-Specific Esterase (MSE) Gene C o r d C . U p h o f f , Z h e n - B o H u , S u z a n n e M . G i g n a c , Weill* M a , Fred A . R a i n e y , M a r i n a K r e u t z , W o l f - D i e t e r L u d w i g , 1 1 1 1 2 3 and Hans G . Drexler' ' D S M , G e r m a n C o l l e c t i o n of M i c r o o r g a n i s m s a n d C e l l Cultures, Department of H u m a n a n d A n i m a l C e l l Cultures, Braunschweig, -'Universitat R e g e n s b u r g , M e d i z i n i s c h e K l i n i k , D e p a r t m e n t o f Internal M e d i c i n e I, R e g e n s b u r g , *Freie U n i v e r s i t a t B e r l i n , U n i v e r s i t a t s k l i n i k u m Rudolf Virchow, Department of M e d i c a l O n c o l o g y and A p p l i e d Molecular Biology, Berlin, G e r m a n y Carboxylic esterases are widely distributed in hematopoietic cells. Monocytes express the esterase isoenzyme (termed 'monocyte-specific esterase', MSE) that can be inhibited by NaF in the a-naphthyl acetate cytochemical staining. We examined the expression of MSE in normal cells and primary and cultured leukemia-lymphoma cells. The MSE protein was demonstrated by isoelectric focusing (IEF); MSE mRNA expression was investigated by Northern blotting and reverse transcriptase-polymerase chain reaction (RT-PCR). The following samples were positive for MSE protein and Northern mRNA expression: 20/24 monocytic, 4/32 myeloid, and 1/20 erythroidmegakaryocytic leukemia cell lines, but none of the 112 lymphoid leukemia or lymphoma cell lines; of the normal purified cell populations only the monocytes were positive whereas, T, B cells, and granulocytes were negative; of primary acute (myelo) monocytic leukemia cells (CD14-positive, FAB M4/M5 morphology) 14/20 were Northern mRNA and 11/14 IEF protein positive. RT-PCR revealed MSE expression in 29/49 Northernnegative lymphoid leukemia-lymphoma cell lines. The RT-PCR signals in monocytic cell lines were on average 50-fold stronger than the mostly weak trace expression in lymphoid specimens. On treatment with various biomodulators, only alltrans retinoic acid significantly upregulated MSE message and protein levels but could not induce new MSE expression in several leukemia cell lines; lipopolysaccharide and interferon-y increased MSE expression in normal monocytes. Analysis of DNA methylation with sensitive restriction enzymes showed no apparent regulation of gene expression by differential methylation; the MSE gene is evolutionarily conserved among mammalian species; the half-life of the human MSE transcripts was about 5-6 h. The extent of MSE expression varied greatly among different monocytic leukemia samples. However, the MSE overexpression in a significant number of specimens was not associated with gene amplification, gross structural rearrangements or point mutations within the cDNA region. Taken together, the results suggest that MSE expression is not absolutely specific for, but strongly associated with cells of the monocytic lineage; MSE is either not expressed at all or expressed at much lower levels in cells from other lineages. The biological significance, if any, of rare MSE messages in lymphoid cells detectable only by the hypersensitive RT-PCR remains unclear. Further studies on the regulation of this gene and on the physiological function of the enzyme will no doubt be informative with respect to its striking overexpression in some malignant cells and to a possible role in the pathobiology of monocytic leukemias. INTRODUCTION Esterases represent a d i v e r s e s p e c t r u m of e n z y m e s w i t h a n u b i q u i t o u s tissue d i s t r i b u t i o n that share certain features Received February 15, 1994. A c c e p t e d April 2 2 , 1994. Correspondence to: D r H a n s G . D r e x l e r , M D , P h D , D S M , G e r m a n C o l l e c t i o n of M i c r o o r g a n i s m s a n d C e l l Cultures, M a s c h e r o d e r W e g 1 B, D - 3 8 1 2 4 B r a u n s c h w e i g , G e r m a n y . LEUKEMIA © 1994 Macmillan 1510 Press Ltd r e g a r d i n g substrate s p e c i f i c i t y (1). T h e s e esterases b e l o n g to the class of serine h y d r o l a s e s that are d e f i n e d as functionally related h y d r o l y t i c e n z y m e s c o n t a i n i n g a serine residue in their a c t i v e site (2). T h i s e n z y m e class c o m p r i s e s the serine protease m u l t i g e n e f a m i l y as w e l l as v a r i o u s c a r b o x y l - , c h o l i n - , aryl-/ acetyl- a n d a c e t y l c h o l i n e s t e r a s e s (3). T h e c a r b o x y l e s t e r a s e s (EC 3.1.1.1) are a heterogeneous g r o u p of c e l l u l a r e n z y m e s c a p a b l e of h y d r o l y z i n g a variety ot a l i p h a t i c o r a r o m a t i c esters u n d e r a c i d i c o r neutral c o n d i t i o n s (4). In h e m a t o l o g y these e n z y m e s are k n o w n as non-specific esterases, a c t i n g most e f f i c i e n t l y o n short-chain (acetate and butyrate) esters. T h e e n z y m a t i c activity c a n b e i n h i b i t e d by s o d i u m f l u o r i d e (NaF) in m o n o c y t i c c e l l s , but not in cells of the g r a n u l o c y t i c series (5); h o w e v e r , it s h o u l d b e noted that NaF-resistance o r sensitivity is here c l e a r l y a relative p h e n o m e n o n (6). N e v e r t h e l e s s , the u n i q u e substrate a n d i n h i b i t o r specificity o f the esterase f o u n d in m o n o c y t e s i n d i c a t e d early o n that the h i g h activity in m o n o c y t e s m i g h t b e d u e to e n z y m e variants that are not present in other l e u k o c y t e s (7). This n o t i o n was strengthened b y data f r o m e l e c t r o p h o r e t i c analyses of e n z y m e extracts, first b y p o l y a c r y l a m i d e g e l e l e c t r o p h o r e s i s a n d later by i s o e l e c t r i c f o c u s i n g (IEF) ( r e v i e w e d in (8)). T h e s e z y m o g r a m IEF studies of n o r m a l a n d m a l i g n a n t m y e l o i d c e l l s h a v e c o n sistently d e m o n s t r a t e d the e x i s t e n c e of t w o m a i n g r o u p s ot esterase b a n d s . O n e g r o u p of IEF b a n d s is c o m m o n to all m y e l o i d c e l l s (termed common esterase, C o m E s t , b y Scott et al. (9)) a n d o n e is a d d i t i o n a l l y d e t e c t e d in c e l l s of m o n o c y t i c o r i g i n (termed monocyte-specific esterase, M S E ) . In the IEF a n a l y s i s the C o m E s t g r o u p appears as a series of b a n d s w i t h isoeletric p o i n t s (pl) r a n g i n g f r o m 6 . 3 - 7 . 9 w h i l e M S E c o m prises 1-5 b a n d s ( d e p e n d i n g o n the IEF system used) w i t h a n a r r o w p l range 5.5-6.2 (3,9). For a l o n g t i m e it w a s not k n o w n w h e t h e r C o m E s t a n d M S E b e l o n g to a m u l t i g e n e f a m i l y representing post-transcript i o n a l l y m o d i f i e d variants o f the s a m e e n z y m e o r w h e t h e r they are c l e a r l y distinct at the m o l e c u l a r a n d g e n e t i c l e v e l , b e i n g related o n l y in their substrate s p e c i f i c i t y (9). R e c e n t e x p e r i m e n t a l e v i d e n c e supports the s e c o n d v i e w , n a m e l y that C o m Est a n d M S E are u n r e l a t e d e n z y m e s p e c i e s : o n e a p p e a r s to be a m o n o m e r i c acetylesterase a n d the other a t r i m e r i c c a r b o x y l esterase, r e s p e c t i v e l y (1,9). W e recently d e m o n s t r a t e d the s p e c i f i c i t y of M S E as e x p r e s s i o n at the m R N A ( e x a m i n e d b y N o r t h e r n blotting) a n d p r o t e i n level (by IEF) w e r e c l e a r l y restricted to c e l l s c o m m i t t e d to the m o n o c y t e - m a c r o p h a g e l i n e a g e (10). In o r d e r to s u b stantiate these c o n c l u s i o n s in a c o m p r e h e n s i v e survey a n d to further c l a r i f y the nature o f M S E , w e a n a l y z e d a greatly extended panel of primary and continuously cultured leukem i a c e l l s a p p l y i n g e x t r e m e l y sensitive d e t e c t i o n m e t h o d s , e x a m i n e d the g e n e e x p r e s s i o n u n d e r in vivo a n d m a n i p u l a t e d in vitro c o n d i t i o n s , a n d c h a r a c t e r i z e d the M S E g e n e in further d e t a i l . LEUKEMIA, Vol 8, N o 9 (September), 1994: pp 1510-1526 MATERIAL AND METHODS Primary Normal and Malignant Cell Material Fresh l e u k e m i a c e l l s w e r e taken f r o m p e r i p h e r a l b l o o d (PB) or b o n e m a r r o w ( B M ) f r o m patients w i t h m y e l o i d l e u k e m i a o f the m o r p h o l o g i c a l M 4 o r M 5 subtypes a c c o r d i n g to t h e F r e n c h - A m e r i c a n - B r i t i s h (FAB) c l a s s i f i c a t i o n . S a m p l e s w e r e sent to the reference l a b o r a t o r y o f a u t h o r W . D . L for i m m u n o p h e n o t y p e a n a l y s i s . P B o r B M m o n o n u c l e a r c e l l s w e r e separated b y standard F i c o l l - H y p a q u e density gradient centrifugation ( L y m p h o p r e p , N y c o m e d , O s l o , N o r w a y ) . A l l s a m p l e s Were e x a m i n e d w i t h the f o l l o w i n g p a n e l o f surface markers using f l o w c y t o m e t r y : C D 2 , C D 3 , C D 4 , C D 7 , C D 1 0 , C D 1 3 , C D 1 4 , C D 1 5 , C D 1 9 , C D 3 3 , C D 3 4 , C D 4 1 , C D w 6 5 , glycop h o r i n A , H L A - D R . C e l l s w e r e p e l l e t e d a n d f r o z e n in l i q u i d nitrogen. N o r m a l P B m o n o n u c l e a r c e l l s taken d i r e c t l y b y venup u n c t u r e o f l a b o r a t o r y staff o r f r o m buffy coats (generously p r o v i d e d b y the G e r m a n R e d C r o s s B l o o d T r a n s f u s i o n C e n t e r , Springe, G e r m a n y ) w e r e isolated b y standard F i c o l l - H y p a q u e density gradient c e n t r i f u g a t i o n . T h e c e l l s w e r e separated f r o m the vast majority o f t h r o m b o c y t e s b y repeated l o w - s p e e d s e d i m e n t a t i o n s ( 2 0 0 x g for 7 m i n ) . M o n o n u c l e a r c e l l s w e r e adjusted t o 2 - 2 0 x 1 0 cells/ml w i t h m a c r o p h a g e - s e r u m free m e d i u m ( M - S F M ; G i b c o B R L , Eggenstein, G e r m a n y ) . Tissue culture dishes (Nunc, W i e s b a d e n , G e r m a n y ) containing 1 0 15 m l o f this c e l l s u s p e n s i o n w e r e i n c u b a t e d for 1 h at 3 7 ° C in a h u m i d i f i e d i n c u b a t o r w i t h 5 % C 0 . N o n - a d h e r e n t c e l l s w e r e s u b s e q u e n t l y r e m o v e d b y w a s h i n g t h e c u l t u r e dishes repeatedly w i t h w a r m phosphate-buffered s a l i n e (PBS) c o n taining 0 . 5 % M-SFM. For R N A preparation cells were washed f r o m the d i s h e s w i t h g u a n i d i n i u m i s o t h i o c y a n a t e . T c e l l s w e r e e n r i c h e d b y s h e e p r e d b l o o d c e l l rosetting ( I C N F l o w , M e c k e n h e i m , G e r m a n y ) . G r a n u l o c y t e s w e r e c o l l e c t e d f r o m the b o t t o m o f the F i c o l l gradient a n d separated f r o m erythrocytes b y a d e x t r a n gradient ( D e x t r a n T - 5 0 0 ; P h a r m a c i a , F r e i b u r g , Germany). N o r m a l B cells were obtained from surgically r e m o v e d tonsils after s h e e p red b l o o d c e l l rosetting o f t h e m o n o n u c l e a r c e l l p r e p a r a t i o n . T h e purities o f the n o r m a l c e l l populations were verified by immunostaining a n d flow cytom e t r i c analysis ( F A C S c a n ; B e c t o n D i c k i n s o n , H e i d e l b e r g , G e r m a n y ) : T c e l l s w e r e e n r i c h e d t o 9 7 % ( C D 3 + ), B c e l l s t o 9 7 % ( C D 1 9 + ), m o n o c y t e s t o 8 6 % ( C D 1 4 + a n d p o s i t i v e i n the a-naphthyl acetate esterase c y t o c h e m i c a l staining), a n d g r a n u l o c y t e s to > 9 5 % ( m o r p h o l o g i c a l analysis). In o r d e r t o increase the q u a n t i t y a n d the purity of a v a i l a b l e n o r m a l m o n o cytes, m o n o c y t e s w e r e isolated f r o m m o n o n u c l e a r c e l l s (after F i c o l l - H y p a q u e centrifugation) b y counter-current e l u t r i a t i o n (JGM-E B e c k m a n c e n t r i f u g e ; B e c k m a n , M u n c h e n , G e r m a n y ) u s i n g a l a r g e - v o l u m e c h a m b e r (50 ml) a n d a JE-5 rotor at 2 5 0 0 r.p.m. a n d a f l o w rate o f 1 1 0 m l / m i n in H a n k ' s b a l a n c e d salt s o l u t i o n s u p p l e m e n t e d w i t h 2 % h u m a n a l b u m i n . Elutriated m o n o c y t e s w e r e > 9 5 % pure as d e t e r m i n e d b y m o r p h o l o g y and antigenic phenotype. 6 2 Culture of Cell Lines and In V i t r o Stimulation A l l h u m a n c e l l lines w e r e d e r i v e d f r o m patients w i t h l e u k e m i a or l y m p h o m a (11). T h e c o n t i n u o u s h u m a n a n d a n i m a l c e l l lines w e r e either taken f r o m t h e stock o f the c e l l b a n k ( D S M , G e r m a n C o l l e c t i o n o f M i c r o o r g a n i s m s a n d C e l l Cultures) (12) or w e r e g e n e r o u s l y m a d e a v a i l a b l e for this study b y t h e o r i g i n a t i n g investigators. C e l l s w e r e g r o w n u n d e r o p t i m a l c o n d i t i o n s in 5 0 m l o r 2 6 0 m l tissue c u l t u r e flasks o r 2 4 - w e l l plates ( N u n c ) in their a p p r o p r i a t e m e d i a ( R P M I 1 6 4 0 , M c C o y ' s 5 A , L e i b o w i t z ' s L-15, Iscove's M D M , D u l b e c c o ' s M E M , o r M E M a l p h a ; G i b c o BRL) s u p p l e m e n t e d w i t h 5 - 2 0 % heat-inactivated (at 5 6 ° C for 4 5 m i n ) fetal b o v i n e s e r u m (Sigma, D e i s e n h o f e n , G e r m a n y ) at 3 7 ° C in a h u m i d i f i e d a t m o s p h e r e o f 5 % C 0 in air. T h e c e l l s w e r e e x a m i n e d d a i l y in t h e c u l t u r e flasks u n d e r a n inverted m i c r o s c o p e . C u l t u r e s w e r e i n c u b a t e d w i t h o u t a n t i b i o t i c s in o r d e r to a v o i d s u b l i m a l b a c t e r i a l i n f e c t i o n . O n l y m y c o p l a s m a - f r e e cultures w e r e u s e d ; f r e e d o m of m y c o p l a s m a c o n t a m i n a t i o n w a s c h e c k e d r o u t i n e l y by D A P I s t a i n i n g a n d c u l t i v a t i o n o n agar. T h e c e l l s w e r e harvested in their l o g a r i t h m i c g r o w t h phase w i t h v i a b i l i t i e s exceeding 9 0 % as d e t e r m i n e d b y trypan blue d y e e x c l u s i o n . C e l l pellets w e r e kept f r o z e n at - 2 0 ° C o r p r o cessed immediately. 2 In vitro s t i m u l a t i o n o f c e l l lines w a s c a r r i e d o u t w i t h t w o protein kinase C (PKC) activators, t h e p h a r m a c o l o g i c a l 1 2 - 0 t e t r a d e c a n o y l p h o r b o l 13-acetate (TPA; Sigma) a n d t h e natural Bryostatin 1 (Bryo 1; k i n d l y p r o v i d e d b y Prof G . R . Pettit, T e m p e , A Z , U S A ) , the v i t a m i n A - a n a l o g u e a\\-trans r e t i n o i c a c i d ( A T R A ; Sigma), a n d the c a l c i u m transport regulator 1,25d i h y d r o x y v i t a m i n D (Vit. D 3 ; Sigma). T h e i n d u c e r s w e r e first d i s s o l v e d in e t h a n o l o r D M S O at 1 0 ~ * M a n d then further d i l u t e d in R P M I 1 6 4 0 m e d i u m s o that the final c o n c e n t r a t i o n s of the solvent w e r e m a x i m a l l y 0 . 0 1 % in the e x p e r i m e n t s . T h e c e l l s w e r e e x p o s e d t o 1 0 ~ M s o l u t i o n s o f the reagents for u p to 4 days. P B m o n o c y t e s a n d s o m e c e l l lines w e r e s t i m u l a t e d w i t h 1 0 0 ng/ml l i p o p o l y s a c c h a r i d e (LPS; Sigma) a n d 2 0 0 U/ml interferon-y (IFN-y; B o e h r i n g e r Mannheim, Mannheim, G e r m a n y ) for u p to 2 4 h. 3 7 RNA Isolation and Northern Blotting Total c e l l u l a r R N A w a s isolated u s i n g the g u a n i d i n i u m isot h i o c y a n a t e - c e s i u m c h l o r i d e m e t h o d (13). N o r t h e r n blots w e r e p r e p a r e d b y separating 10 /xg o f total R N A in a n agarose gel c o n t a i n i n g 1 % f o r m a l d e h y d e . T h e R N A w a s transferred to a n y l o n m e m b r a n e ( N y t r a n , S c h l e i c h e r a n d S c h u l l , D a s s e l , G e r m a n y ) a n d cross-linked w i t h 1 2 0 0 J ultraviolet light ( U V Stratalinker 1 8 0 0 ; Stratagene, H e i d e l b e r g , G e r m a n y ) . After 2 h of p r e - h y b r i d i z a t i o n t h e filters w e r e h y b r i d i z e d w i t h a nicktranslated ( G i b c o BRL) o r r a n d o m p r i m e d ( U S B , B a d H o m b u r g , G e r m a n y ) [«- P]dCTP-labeled HMSE-1 p r o b e o v e r n i g h t at 6 2 ° C . T h e filters w e r e then w a s h e d stringently a n d e x p o s e d for a u t o r a d i o g r a p h y t o X-ray films (Fuji RX) w i t h intensifying screens at - 8 0 ° C . Filters w e r e r e h y b r i d i z e d w i t h a h o u s e k e e p i n g gene as the c o n t r o l . }2 Probes A 1 7 4 6 - b p EcoRI fragment c l o n e d into p U C 1 9 c o n t a i n i n g the partial c o d i n g s e q u e n c e ( n u c l e o t i d e s - 1 0 to 1 5 1 2 f r o m the 3'-end o f t h e H M S E gene) w a s k i n d l y p r o v i d e d b y D r F. Z s c h u n k e ( G o t t i n g e n , G e r m a n y ) (2). A 2 3 8 - b p fragment o f the HMSE-1 c D N A f r o m the 5'-end (nt - 1 0 t o 2 2 8 , o b t a i n e d after BamHl d i g e s t i o n a n d e x t r a c t i o n f r o m t h e gel) w a s e m p l o y e d in s o m e e x p e r i m e n t s . T h e /3-actin p r o b e p A c t - 1 , a 1.25-kb Pst\ fragment ( c l o n e d i n p B R 3 2 2 ) f r o m t h e c D N A o f hamster j8a c t i n (obtained f r o m D r J . W . G . Janssen, U l m , G e r m a n y ) w a s used as c o n t r o l . Determination of RNA Half-Life T h e half-life o f the M S E m R N A w a s d e t e r m i n e d b y e x p o s u r e of the c e l l s t o 10/Ltg/ml a c t i n o m y c i n D (Sigma), a n i n h i b i t o r of t r a n s c r i p t i o n , for 0 - 2 4 h b e f o r e harvest of the c e l l s a n d s u b sequent i s o l a t i o n of R N A . 4 h with air c o o l i n g . Subseqently the gel w a s dried and e x p o s e d to an X-ray f i l m for a u t o r a d i o g r a p h y o v e r n i g h t at room temperature. Reverse PCR) Transcriptase-Polymerase Chain Reaction (RTDNA Five m i c r o g r a m s of total R N A w a s used as a t e m p l a t e for first strand c D N A synthesis u s i n g a reverse transcriptase p r e a m p l i f i c a t i o n system kit ( S u p e r s c r i p t ; G i b c o BRL) in a final v o l u m e of 2 0 /il P C R buffer ( c o n t a i n i n g 2 0 m M Tris-HCI of p H 8.4, 5 0 m M K C I , 2.5 m M M g C I , 0.1 mg/ml BSA) s u p p l e m e n t e d w i t h 0.5 /Ag of o l i g o d T p r i m e r . After h e a t i n g the m i x t u r e at 7 0 ° C for 10 m i n , 2 0 0 U of M o l o n e y m u r i n e l e u k e m i a virus reverse transcriptase a n d 1 /LLI of 1 0 m M d N T P m i x w e r e a d d e d to the r e a c t i o n s y s t e m . T h e r e a c t i o n m i x t u r e w a s t h e n i n c u bated at 4 2 ° C for 5 0 m i n , at 9 0 ° C for 5 m i n a n d t h e n q u i c k l y c h i l l e d o n i c e . After brief c e n t r i f u g a t i o n , 2 U R N a s e H w a s a d d e d to the r e a c t i o n m i x t u r e for 2 0 m i n at 3 7 ° C . R N A s a m p l e s f r o m s o m e c e l l lines w e r e treated w i t h D N a s e I (RNase-free f r o m B o e h r i n g e r M a n n h e i m ) p r i o r to reverse t r a n s c r i p t i o n . T h e r e a c t i o n w a s i n c u b a t e d at 3 7 ° C for 1 h a n d then at 9 5 ° C for 5 m i n a n d i m m e d i a t e l y c o o l e d o n i c e . F i v e m i c r o l i t r e s of the reverse transcriptase r e a c t i o n m i x t u r e c o n t a i n i n g the first strand c D N A w a s d i l u t e d w i t h P C R buffer (10 X : 5 0 0 m M K C I , 15 m M M g C I , 1 0 0 m M Tris-HCI p H 8 . 3 , 0 . 0 0 1 % gelatin) c o n t a i n i n g 2 0 p m o l of e a c h u p s t r e a m a n d d o w n s t r e a m p r i m e r , 10 n m o l of d N T P m i x a n d 1.25 U of T a q DNA polymerase (Amersham-Buchler, Braunschweig, G e r m a n y ) . T h e p r i m e r s used in the e x p e r i m e n t w e r e d e s i g n e d a c c o r d i n g to s e q u e n c e d a t a p u b l i s h e d p r e v i o u s l y (2): sense 5'G G C A G T T A C T C T C A G A G C T A - 3 ' (sequence nucleotides 9 2 1 1 1 , MSE-P1) a n d antisense 5 ' - C T T C C A C A G G A G T G A C A T G G C - 3 ' ( s e q u e n c e n u c l e o t i d e s 9 6 0 - 9 4 0 , MSE-P2). O l i g o n u c l e o t i d e p r i m e r s w e r e p r e p a r e d o n an a u t o m a t e d D N A s y n t h e s i z e r ( C y l c o n e Plus, M i l l i p o r e , E s c h b o r n , G e r m a n y ) . T h e P C R w a s t h e n p e r f o r m e d w i t h a D N A t h e r m a l c y c l e r (Perkin E l m e r C e t u s , H e i d e l b u r g , G e r m a n y ) for 3 2 c y c l e s u n d e r the f o l l o w i n g c o n d i t i o n s : 3 0 s at 9 4 ° C for d e n a t u r a t i o n , 3 0 s at 5 5 ° C for a n n e a l i n g , a n d 2 m i n at 7 2 ° C for e x t e n s i o n . T h e a m p l i f i e d P C R p r o d u c t s w e r e e l e c t r o p h o r e s e d in 1 . 2 % a g a rose gels, s t a i n e d w i t h e t h i d i u m b r o m i d e a n d o b s e r v e d u n d e r u l t r a v i o l e t light. G e l s w e r e b l o t t e d o n t o n y l o n filters u s i n g the S o u t h e r n t e c h n i q u e as d e s c r i b e d b e l o w . In o r d e r to assess the q u a l i t y of reverse t r a n s c r i b e d R N A a n d s u c c e s s f u l P C R - a m p l i f i c a t i o n , a l i q u o t s f r o m the s a m e p r o d u c t s o b t a i n e d f r o m reverse t r a n s c r i p t i o n w e r e a m p l i f i e d in p a r a l l e l u s i n g the f o l l o w i n g t w o j3-actin p r i m e r s : sense 5 ' - A T G G A T G A T G A T A T C G C C G C G - 3 ' a n d antisense 5 ' - C T A G A A G C A T T T G C G G T GGAC-3'. 2 2 Polymerase Conformation Chain Reaction Polymorphism and Single-Strand (PCR-SSCP) P C R - S S C P a n a l y s i s w a s m o d i f i e d f r o m the p r e v i o u s d e s c r i p t i o n (14). In brief, 6 /Ltl reverse t r a n s c r i b e d c D N A w a s a m p l i fied b y P C R (30 c y c l e s ; the s a m e c o n d i t i o n s as u n d e r RT-PCR) in the p r e s e n c e o f 10 fid [ a - P ] d C T P u s i n g the t w o p r i m e r s MSE-P1 a n d M S E - P 2 (see a b o v e ) . F r o m the a m p l i f i c a t i o n p r o d u c t 4 /LLI w e r e d i l u t e d 1 : 2 5 w i t h 0 . 1 % S D S , 10 m M E D T A a n d heated at 9 5 ° C after a d d i n g 1 v o l u m e s e q u e n c i n g stop solution ( 9 5 % formamide, 20 mM EDTA, 0 . 0 5 % bromophenol b l u e , 0 . 0 5 % x y l e n e c y a n o l , 2 0 m M N a O H ) . T h e n , 2-4 /il of this m i x t u r e w a s l o a d e d o n t o a 6 % n o n - d e n a t u r i n g p o l y a c r y l a m i d e gel c o n t a i n i n g 9 0 m M Tris-borate, 2 m M E D T A ( p H 8), a n d 1 0 % g l y c e r o l . E l e c t r o p h o r e s i s w a s p e r f o r m e d at 2 5 W for 32 Sequencing R T - P C R p r o d u c t s w e r e p u r i f i e d u s i n g Jetsorb ( G e n o m e d , Bad O e y n h a u s e n , G e r m a n y ) . RT-PCR p r o d u c t s w e r e s e q u e n c e d u s i n g the T a q D y e D e o x y ™ T e r m i n a t o r C y c l e S e q u e n c i n g Kit ( A p p l i e d B i o s y s t e m s , W e i t e r s t a d t , G e r m a n y ) . T h e primers used w e r e MSE-P1 as sense, antisense 5 ' - G G T T C T T G G C C A A T G G A G A C A - 3 ' ( s e q u e n c e n u c l e o t i d e s 5 2 6 - 5 0 6 , MSE-P3), antisense 5'-GGCTGG ATCTTCATTCACAGC-3' (sequence n u c l e o t i d e s 1 5 2 6 - 1 5 0 6 , MSE-P4), a n d M S E - P 2 as antisense at a c o n c e n t r a t i o n of 4 p m o l per s e q u e n c e r e a c t i o n . T h e s e q u e n c i n g w a s p e r f o r m e d w i t h the D N A t h e r m a l c y c l e r for 25 c y c l e s u n d e r the f o l l o w i n g c o n d i t i o n s : 3 0 s at 9 6 ° C for d e n a t u r a t i o n , 15 s at 5 0 ° C for a n n e a l i n g , a n d 4 m i n at 6 0 ° C for e x t e n s i o n . T h e s e q u e n c e r e a c t i o n s w e r e p u r i f i e d as d e s c r i b e d by the m a n u f a c t u r e r . T h e s e q u e n c e r e a c t i o n s w e r e e l e c t r o p h o r e s e d u s i n g the A p p l i e d B i o s y s t e m ' s 3 7 3 A D N A S e q u e n c e r . Southern Blotting H i g h m o l e c u l a r w e i g h t D N A w a s e x t r a c t e d f r o m f r o z e n PBSw a s h e d l e u k e m i c c e l l s u s i n g s t a n d a r d m e t h o d s (13). For the different e x p e r i m e n t s 2 0 /ig of D N A w a s d i g e s t e d o v e r n i g h t w i t h 1 0 0 U of o n e of the restriction e n z y m e s HindlW ( P h a r m a c i a , F r e i b u r g , G e r m a n y ) , # a m H I , EcoRI, Pst\ ( G i b c o BRL), M s p l , /-/pall, o r Cfo\ ( B o e h r i n g e r M a n n h e i m ) . T o 1/10 of the r e a c t i o n m i x 2 0 0 n g l a m b d a D N A ( P h a r m a c i a ) w a s a d d e d as c o n t r o l . T h e d i g e s t e d D N A w a s e x t r a c t e d w i t h p h e n o l , p r e c i p i t a t e d in e t h a n o l a n d separated in a 0 . 7 % agarose g e l . T h e D N A w a s f i x e d w i t h 0.2 N H C I a n d t h e n d e n a t u r e d w i t h 0.5 M N a O H / 1 . 5 M N a C I . After n e u t r a l i z a t i o n w i t h 0.5 M Tris-HCI ( p H 7.0)/3 M N a C I the D N A w a s b l o t t e d w i t h 2 0 x S S C o n n y l o n m e m b r a n e s a n d then treated and h y b r i d i z e d as d e s c r i b e d a b o v e u n d e r N o r t h e r n blot a n a l y s i s . Pulsed Field Gel Electrophoresis P u l s e d f i e l d gel e l e c t r o p h o r e s i s (PFGE) is an e l e c t r o p h o r e t i c t e c h n i q u e alternative to standard S o u t h e r n a n a l y s i s that uses a l t e r n a t i n g pulses of current d i r e c t e d at a n g l e s t h r o u g h an a g a rose gel to separate large D N A restriction fragments. D i g e s t e d g e n o m i c D N A w a s separated o n a 1 . 5 % agarose gel u s i n g the C h e f - D r II P F G E system (Bio-Rad, M u n c h e n , G e r m a n y ) a c c o r d i n g to the r e c o m m e n d a t i o n s of the m a n u f a c t u r e r . In brief, the gel w a s run for 5 h at 14°C a p p l y i n g a 2 0 0 V i n v e r t i n g f i e l d . T h e s w i t c h i n g c y c l e i n c r e a s e d f r o m 1 to 4 s o v e r these 5 h. F o l l o w i n g P F G E the gel w a s treated s i m i l a r l y to a s t a n d a r d S o u t h e r n b l o t . Isoelectric Focusing E n z y m e e x t r a c t i o n , s e p a r a t i o n b y IEF a n d v i s u a l i z a t i o n of esterase i s o e n z y m e s h a v e b e e n d e s c r i b e d in d e t a i l e l s e w h e r e (10). In brief, e n z y m e s w e r e e x t r a c t e d b y repeated c y c l e s of f r e e z i n g - t h a w i n g a n d s o l u b i l i z e d b y a d d i t i o n of T r i t o n X 1 0 0 (Serva, H e i d e l b e r g , G e r m a n y ) . After c e n t r i f u g a t i o n , a l i q u o t s of supernatant c o n t a i n i n g the e n z y m e p r e p a r a t i o n (extracted f r o m e q u a l n u m b e r s o f cells) w e r e separated b y a n a l y t i c a l IEF o n h o r i z o n t a l thin-layer p o l y a c r y l a m i d e gels ( 4 . 8 % a c r y l / b i s a c r y l a m i d e , p H range 2-11 of the a m p h o l y t e Servalyt; Serva) u s i n g an L K B M u l t i p h o r system ( P h a r m a c i a ) . Isoe n z y m e s w e r e v i s u a l i z e d o n the gels by s u b m e r s i o n in a s t a i n ing s o l u t i o n c o n t a i n i n g a - n a p h t h y l acetate (Sigma) as substrate a n d Fast B l u e RR (Serva) as the c o u p l i n g d i a z o n i u m salt. A d d i t i o n of 4 0 m M N a F to the s t a i n i n g bath i n h i b i t e d s e l e c tively the M S E b a n d at a b o u t p H 6.0 (3). B a n d s o n a u t o r a d i o g r a p h e d R N A films after N o r t h e r n blot analysis o r RT-PCR S o u t h e r n b l o t t i n g a n d o n d r i e d IEF gels w e r e q u a n t i f i e d densit o m e t r i c a l l y (LKB U l t r o s c a n D e n s i t o m e t e r ; P h a r m a c i a ) . RESULTS Expression of MSE Detection of Protein by IEF and of mRNA by Northern Blotting. M S E p r o t e i n w a s d e m o n s t r a t e d by IEF o n p o l y a c r y l a m i d e gels as a d i s t i n c t b a n d w i t h an isoeletric p o i n t of a b o u t p H 6 . 0 . T h i s b a n d c o u l d be s e l e c t i v e l y i n h i b i t e d by N a F . In the N o r t h e r n blot a n a l y s i s a s i n g l e b a n d c o r r e s p o n d i n g to an M S E transcript of 2.0 k b w a s d e t e c t e d . E x p r e s s i o n of M S E p r o tein a n d m R N A w e r e e x a m i n e d in all s a m p l e s , i.e. n o r m a l c e l l p o p u l a t i o n s , p r i m a r y l e u k e m i a c e l l s , a n d l e u k e m i a c e l l lines, by IEF a n d N o r t h e r n b l o t t i n g , r e s p e c t i v e l y (Tables 1 a n d 2; Figures 1 a n d 2). O f the p u r i f i e d n o r m a l c e l l p o p u l a t i o n s {n= 10 f r o m different i n d i v i d u a l s ) , o n l y the PB m o n o c y t e p r e p a r a t i o n s c o n s i s t - Table 1 e n t l y d i s p l a y e d M S E p r o t e i n a n d m R N A , w h e r e a s PB T c e l l s , PB g r a n u l o c y t e s , a n d t o n s i l l a r B c e l l s w e r e all negative. T w e n t y - t w o PB or B M acute ( m y e l o ) m o n o c y t i c l e u k e m i a s a m p l e s , d i a g n o s e d as s u c h o n m o r p h o l o g i c a l - c y t o c h e m i c a l (FAB M 4 or M 5 ) a n d i m m u n o p h e n o t y p i c a l g r o u n d s ( C D 1 4 + ) , w e r e tested. m R N A e x p r e s s i o n w a s f o u n d in 14/20 cases tested; 11/14 cases a n a l y z e d s h o w e d the M S E b a n d in the IEF. M S E e x p r e s s i o n w a s e x a m i n e d in 1 8 8 c e l l lines (Table 2). A l l 112 l y m p h o i d l e u k e m i a a n d l y m p h o m a c e l l lines w e r e negative at the N o r t h e r n m R N A a n d p r o t e i n level (29 pre Bc e l l l e u k e m i a , 17 B-cell l e u k e m i a , 21 T-cell l e u k e m i a , 13 m y e l o m a , 8 Burkitt, 8 H o d g k i n , a n d 16 n o n - H o d g k i n l y m p h o m a c e l l lines). In the c a t e g o r y ' m y e l o i d l e u k e m i a c e l l l i n e s ' {n = 32) four a n d five c e l l lines w e r e M S E - p o s i t i v e in the IEF a n d N o r t h e r n a n a l y s i s , r e s p e c t i v e l y . O n e out of 2 0 c e l l lines w i t h m e g a k a r y o c y t i c and/or e r y t h r o i d features s h o w e d the M S E b a n d s in the IEF a n d N o r t h e r n gels. T h e M S E isoe n z y m e a n d the M S E transcript w e r e f o u n d in 20/24 c e l l lines. Detection of mRNA by RT-PCR. T o assess the d e t e c t i o n sensitivity of the IEF, N o r t h e r n a n d RT-PCR a n a l y s i s , p o s i t i v e c e l l s w e r e d i l u t e d w i t h M S E - n e g a t i v e c e l l s . In p r e l i m i n a r y e x p e r i m e n t s w e s h o w e d that it w a s p o s s i b l e w i t h IEF to v i s u a l i z e a n M S E - p o s i t i v e p o p u l a t i o n in a m i x t u r e c o n s i s t i n g of 1 % p o s i t i v e c e l l s (cell l i n e T H P - 1 ) a n d 9 9 % negative c e l l s (RC-2A). T h e d i l u t i o n e x p e r i m e n t s p e r f o r m e d here r e v e a l e d that N o r t h e r n b l o t t i n g h a d a m a x i m a l sensitivity of 2 . 5 % posi- E x p r e s s i o n o f M S E m R N A a n d P r o t e i n in P r i m a r y H u m a n L e u k e m i a C e l l s Patient no. Surface Marker E x p r e s s i o n CD13 CD14 CD15 CD33 F A B Subtype 3 CDw65 M S E Expression Protein IEF b mRNA mRNA Northern 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 70 10 44 50 75 24 24 12 82 71 37 6 34 34 30 37 82 34 82 21 14 16 56 5 75 70 60 34 40 52 55 85 34 44 69 47 55 62 70 60 47 19 33 57 31 75 5 70 37 20 30 44 47 11 26 34 16 20 12 0 13 14 48 32 77 23 90 35 79 90 76 76 60 20 81 85 83 56 75 80 80 36 70 90 71 73 82 50 80 70 66 87 60 20 68 80 49 83 63 56 76 86 80 52 45 72 35 66 87 70 M5 M5 M4 M5 M4eo M4 M4 M5a M5 M4 M4 M5 M5a M5b M4 M4 M4eo M4eo M4eo M4/M5 M5 M5 (+) + - [0.71X]* [0.95x] + (+) (+) [1.01x] [0.59x] [0.70x] + ++ (+) [1.19x] [4.43x] [0.37x] (+) [0.61x] ++ ++ [6.22x] [5.74x] - ++ [2.89x] + [0.55x] + (+) [1.24x] [0.1 Ox] + (+) (+] [1.06x] [0.40x] [0.25x] (+) (+) + (+) (+) [0.24x] [0.36x] [0.48x] [0.1 Ox] [0.08x] ++ + [5.61x] [0.18x] - - - RT-PCR 5 C d + - + + + + + E x p r e s s i o n of these surface markers (percentage of positive cells) was examined by indirect immunofluorescence staining and either microscopic or flow cytometric analysis using the monoclonal antibodies My7 (CD13), VIM-13 or U C H M 1 (CD14), VIM-D5 (CD15), My9 (CD33), VIM-2 (CDw65); other markers examined are not listed but confirmed the diagnosis. "Intensity of bands on IEF gels and Northern gels; the intensity of expression (thickness of the band) was g r a d e d in comparison with those from normal control monocyte samples: -, negative; ( + ), weaker; +, same intensity; + + , overexpression (stronger band), intensity of bands on Southern gels hybridized with the HMSE-1 probe after RT-PCR: -, negative; +, positive. i n t e n s i t y of expression (thickness of bands in IEF and Northern) analyzed densitometrically in comparison with normal unstimulated monocytes; data are given as X-fold of the normal values. Cell Line Origin Protein 3 IEF" Pre-B 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 Leukemia Cell 1E8 207 380 697 ALL-1 BAY-91 BV-173 EU-1 HAL-01 HPB-NULL KARPAS-353 KOPN-8 LAZ-221 LILA-1 LK-63 MIK-ALL NALM-1 NALM-6 NALM-16 OM9;22 PC-53 PRE-ALP RCH-ACV REH RS4;11 SUP-B15 SUP-B27 TAHR-87 TOM-1 Lines Pre B-ALL Pre B-ALL ALL Pre B-ALL Pre B-ALL ALL CML-BC ALL Pre B-ALL ALL Pre B-ALL ALL ALL Pre B-ALL Pre B-ALL Pre B-ALL CML-BC ALL ALL ALL Pre B-ALL Pre B-ALL Pre B-ALL ALL ALL Pre B-ALL Pre B-ALL AUL Pre B-ALL - B Leukemia Cell Lines 1 BALL-1 2 BALM-1 BALM-6 3 4 BALM-8 5 BONNA-12 6 EH 7 EHEB ESKOL 8 9 HAIR-M HC-1 10 11 HK 12 JVM-2 JVM-3 13 14 JVM-13 15 KARPAS-231 16 MN-60 17 WIEN-133 ALL B-ALL B-ALL B-ALL HCL HCL B-CLL HCL HCL HCL HCL B-PLL B-PLL B-PLL B-ALL B-ALL B-ALL - T Leukemia Cell Lines 1 BE-13 2 CCRF-CEM CML-T1 3 4 DU-528 5 HPB-ALL 6 JURKAT 7 KE-37 8 LOUCY MDS 9 10 MKB-1 11 MOLT-3 12 MOLT-13 13 MOLT-15 14 MOLT-16 MOLT-17 15 MO-T 16 T-ALL ALL CML-BC T-ALL T-ALL T-ALL T-ALL T-ALL CMMoL AML ALL T-ALL AMoL T-ALL T-ALL HCL mRNA Northern" - - - - - - - - RT-PCR + (+) - - - - - (+) - - - - - - - - — - — - - - - - (+) + + — - - - - - - (+) ++ - - — - ++ + - - - - - (+) - (+) -- C Cell Line Origin Protein 3 IEP T Leukemia Cell Lines (Continued,) 17 MT-1 18 P12/ICHIKAWA 19 PEER 20 PF-382 21 SKW-3 ATL ALL T-ALL ALL CLL Myeloma Cell Lines 1 EJM 2 IM-9 3 KARPAS-620 4 KARPAS-707 5 L-363 6 LP-1 7 MM-1 8 MM-S1 9 NCI-H929 10 OPM-2 11 U-266 12 U-1958 13 U-1996 Myeloma Myeloma Plasma cell leukemia Myeloma P l a s m a cell leukemia Myeloma Myeloma Myeloma Myeloma Myeloma Myeloma Plasma cell leukemia Myeloma Burkitt 1 2 3 4 5 6 7 8 - Hodgkin Lymphoma 1 CO 2 HDLM-1 3 HDLM-2 4 HDLM-3 5 KM-H2 6 L-428 7 L-540 8 SUP-HD1 Cell Lines Hodgkin Hodgkin Hodgkin Hodgkin Hodgkin Hodgkin Hodgkin Hodgkin Non-Hodgkin Lymphoma 1 DEL 2 DOHH-2 3 HBL-1 4 HT-58 5 KARPAS-299 6 KARPAS-422 7 MC-116 8 MH-1 9 PFI-285 10 RL 11 SCC-3 12 ST-4 13 SUP-T1 14 U-698-M 15 WSU-NHL 16 WSU-WM Myeloid Leukemia 1 EM-2 2 EM-3 3 EOL-1 4 EOL-3 5 GDM-1 6 GF-D8 Cell Lines CML-BC CML-BC AML-eosino AML-eosino CML-BC A M L M1 - (+) - - - + - - - - - - - - - - - - - - - - — — - - - - - - - - - - - -f - - - (+) - - - - - - - - - - - Cell Lines Malignant histiocytosis B N H L (immunoblastic) B N H L (diffuse large cell) B N H L (centroblastic) T N H L (histiocytic) B NHL B N H L (undifferentiated) Malignant histiocytosis T NHL B N H L (undifferentiated) N H L (diffuse large cell) T N H L (convoluted type) T N H L (lymphoblastic) B N H L (lymphoblastic) B N H L (histiocytic) Waldenstrom RT-PCR - - (nodular sclerosis) (nodular sclerosis) (nodular sclerosis) (nodular sclerosis) (mixed cellularity) (nodular sclerosis) (nodular sclerosis) (nodular sclerosis) Northern" - - Lymphoma Cell Lines BJAB Burkitt CA-46 Burkitt DAUDI Burkitt DG-75 Burkitt EB-1 Burkitt NAMALWA Burkitt NAMALWA-IPN.45 Burkitt ROS-17 Burkitt mRNA (+) + + (+) - + (+) + (+) ++ (+) - - - — + - + (+) + (+) + + + + - - ++ — - - - + - C Cell Line Origin Myeloid Leukemia Cell Lines (Continued,) 7 AML GM-153 8 GM/SO CML-BC 9 HL-60 A M L M2 10 Mast cell leukemia HMC-1 11 KASUMI-1 A M L M2 12 KBM-7 CML-BC KCL-22 CML-BC 13 14 AML KG-1 15 KG-1A AML 16 KMT-2 Umbilical cord blood 17 KOPM-28 CML-BC 18 KU-812 CML-BC 19 KU-812F CML-BC 20 KY-821 AML 21 CML-BC KYO-1 22 CML-BC MOLM-6 23 MOLM-7 CML-BC 24 CML-BC MOLM-8 25 MR-87 AML 26 NB-4 A M L M3 27 OCI-AML-5 AML 28 PL-21 AML M3 29 TI-1 AML M2 30 TS9;22 CML-BC 31 UCSD/AML-1 AML 32 YS9;22 CML-BC Monocytic Leukemia Cell Lines 1 CTV-1 AML M5 2 DD Histiocytic lymphoma 3 JOSK-I A M L M4 4 JOSK-K AML M5 5 JOSK-M CML-BC 6 A M L M5 JOSK-S 7 KBM-3 A M L M4 8 KBM-5 CML-BC ML-2 A M L M4 9 10 MOBS-1 AMoL 11 MONO-MAC-6 AML M5 12 MV4-11 A M L M5 13 NOMO-1 AMoL 14 OCI-AML-1 AML M4 15 OCI-AML-2 A M L M4 16 OCI-AML-3 A M L M4 17 PLB-985 A M L M4 18 RC-2A A M L M4 RW-LEU-4 CML-BC 19 20 SKM-1 AMoL THP-1 AML M5 21 22 TK-1B A M L M4 23 U-937 Histiocytic lymphoma 24 X-376 AML Megakaryocytic-Erythroid 1 CHRF-288-11 2 CMK DAMI 3 4 F-36P F-36EGM 5 6 HEL 7 K-562 8 KMOE-02 9 LAMA-84 10 M-07e 11 MB-02 12 MEG-01 Protein 3 Leukemia Cell Lines A M L M7 A M L M7 A M L M7 AML M6 A M L M6 A M L M6 CML-BC A M L M6 CML-BC A M L M7 A M L M7 CML-BC mRNA IEF" Northern" RT-PCR - - - - (+) (+) + (+) - - - - - - - +++ ++ ++ +++ + (+) (+) + +++ (+) +++ +++ ++ ++ +++ +++ +++ (+) +++ +++ (+) +++ + + + ++ +++ + + ++ +++ +++ (+) +++ + +++ +++ ++ (+) ++ - - - - - - - - - - — (+) (+) ++ - (+) (+) (+) ++ + +++ +++ ++ + (+) ++ - + + + + -»+++ +++ ++ ++ +++ +++ +++ +++ +++ + +++ +++ +++ +++ +++ +++ ++ +++ + ++ ++ (+) + (+) +++ ++ (+) C Cell Line Megakaryocytic-Erythroid 13 MEGAL 14 MKPL-1 15 MOLM-1 16 0CI-M1 17 0CI-M2 18 T-33 19 TF-1 20 UT-7 Origin Protein 3 Leukemia Cell Lines A M L M7 A M L M7 CML-BC A M L M6 A M L M6 CML-BC A M L M6 A M L M7 (Continued) mRNA IEF" Northern" RT-PCR - - - - - - ++ + ++ + + +++ C + +++ A L L , acute lymphoblastic leukemia; A M L , acute myeloid leukemia; A M o L , acute (myelo)monocytic leukemia; ATL, adult T-cell leukemia; A U L , acute undifferentiated leukemia; C L L , chronic lymphocytic leukemia; CMLB C , chronic myeloid leukemia in blast crisis; C M M o L , chronic myelomonocytic leukemia; H C L , hairy cell leukemia; NHL, non-Hodgkin's lymphoma; PLL, prolymphocytic leukemia. C e l l lines were assigned to the respective categories b a s e d on their origin and their phenotypic and functional characteristics (e.g. surface markers, receptor gene rearrangements, expression of hemoglobin, etc.); original diagnoses (types and subtypes of malignancies) are given as far as indicated in the original publications (see also (11)). "Intensity of bands on IEF gels and Northern gels; the intensity of expression (thickness of the band) was g r a d e d in comparison with those from normal control monocyte samples: -, negative; ( + ), weaker; +, same intensity, + + , overexpression (stronger band); + + + , strong overexpression (very strong band), intensity of bands on Southern gels hybridized with the HMSE-1 probe after RT-PCR; -, negative; ( + ), weakly positive; +, + + , + + + , different degrees of positivity. a tive c e l l s (PLB-985) in a b a c k g r o u n d of 9 7 . 5 % negative c e l l s (KG-1). RT-PCR w a s 5 0 - 2 5 0 times m o r e sensitive than N o r t h ern as the RT-PCR p r o d u c t of M S E w a s r e p r o d u c i b l y detecta b l e at a 1 : 2 0 0 0 to 1 : 10 0 0 0 d i l u t i o n . T h e s e results c o n f i r m s i m i l a r levels of sensitivity in d i l u t i o n e x p e r i m e n t s d o n e to detect the e n z y m e m y e l o p e r o x i d a s e ( M P O ) : 1 - 3 % for N o r t h ern a n d 0 . 0 5 - 0 . 1 % for RT-PCR (15). T h e m o r e sensitive RTP C R m e t h o d w a s c a r r i e d out, b o t h to c o n f i r m the results o b t a i n e d by N o r t h e r n b l o t t i n g , a n d to further c h a r a c t e r i z e a n y trace e x p r e s s i o n of c e l l lines negative at the p r o t e i n a n d N o r t h e r n m R N A l e v e l . T h e RT-PCR generated a u n i q u e a n d a c c u r a t e l y s i z e d p r o d u c t of 8 6 8 b p . T h e identity of P C R p r o d u c t s f r o m the c e l l lines w a s c o n f i r m e d by S o u t h e r n blots of the P C R p r o d u c t s (Figure 3). T h e intensity of e x p r e s s i o n s h o w n by RT-PCR is, of c o u r s e , a gross estimate a n d not an exact q u a n t i f i c a t i o n (since w e d i d not p e r f o r m q u a n t i t a t i v e P C R ) , but p r o v i d e s nevertheless a c l e a r a n d r e p r o d u c i b l e p i c t u r e of M S E trace e x p r e s s i o n . O n e h u n d r e d a n d fourteen c e l l lines w e r e e x a m i n e d for M S E m R N A e x p r e s s i o n by RT-PCR u s i n g p r i m e r s MSE-P1 a n d -P2, f o l l o w e d by S o u t h e r n b l o t t i n g a n d h y b r i d i z a t i o n w i t h the HMSE-1 p r o b e (Table 2). Seventy-two c e l l lines w e r e p o s i t i v e ; u p o n s i g n i f i c a n t l y longer e x p o s u r e of the f i l m s to the r a d i o a c t i v e filter a further 17 of the 4 2 i n i t i a l l y negative c e l l lines s h o w e d w e a k b a n d s . O f the 4 9 N o r t h e r n - n e g a t i v e l y m p h o i d l e u k e m i a a n d l y m p h o m a c e l l lines, 2 9 ( 5 9 % ) w e r e p o s i t i v e , most of t h e m w e a k l y or v e r y w e a k l y . S y s t e m i c c o n t a m i n a t i o n s w e r e e x c l u d e d as negative c o n t r o l c e l l lines a n d negative c o n t r o l s ( H 0 ) w e r e c o n s i s t e n t l y negative in all e x p e r i m e n t s ; f u r t h e r m o r e , the results w e r e c o n f i r m e d in 2 4 c e l l lines u s i n g the p r i m e r pair MSE-P1 a n d -P3. N o p a r t i c u l a r pattern of p o s i t i v i t y or negativity w a s seen a m o n g the v a r i o u s c a t e g o r i e s . Eighteen of 22 N o r t h e r n - n e g a t i v e m y e l o i d l e u k e m i a c e l l lines d i s p l a y e d b a n d s in the RT-PCR S o u t h e r n blots. A l l 21 m o n o c y t i c c e l l lines investigated w e r e RT-PCR-positive i n c l u d i n g four c e l l lines that w e r e b o t h IEF- a n d N o r t h e r n 2 negative. W i t h o n e e x c e p t i o n a l l s a m p l e s (A? = 1 8 ) f r o m c e l l c u l t u r e s w i t h m e g a k a r y o c y t i c - e r y t h r o i d features w e r e N o r t h ern-negative, but RT-PCR-positive. S c a n n i n g d e n s i t o m e t r y of the RT-PCR S o u t h e r n blots i n d i c a t e d that M S E m R N A w a s a p p r o x i m a t e l y 1 0 - 5 0 - f o l d a n d 3-10-fold m o r e a b u n d a n t in m o n o c y t i c c e l l lines (e.g. JOSK-I, )OSK-K, j O S K - S , U-937) than in l y m p h o i d l e u k e m i a (e.g. J V M - 1 3 , N A L M - 6 , REH) a n d e r y t h r o i d - m e g a k a r y o c y t i c c e l l lines (e.g. F-36P, L A M A - 8 4 , O C I - M 1 ) , respectively. Overexpression of MSE P r e v i o u s l y , w e noted a striking v a r i a b i l i t y in the s t a i n i n g i n t e n sity of the M S E p r o t e i n b a n d in the IEF a m o n g different m o n o c y t i c l e u k e m i a s a m p l e s w h i c h , h o w e v e r , w a s not e v i d e n t in n o r m a l c o n t r o l s . C o m p a r e d w i t h the b a n d s f r o m n o r m a l PB m o n o c y t e p o p u l a t i o n s a c e r t a i n p e r c e n t a g e of the l e u k e m i c s p e c i m e n s s h o w e d i n c r e a s e d e x p r e s s i o n of the i s o e n z y m e . A s c e l l extracts w e r e p r e p a r e d f r o m the s a m e n u m b e r of c e l l s a n d e q u a l a m o u n t s of m R N A (10 /ig) w e r e a p p l i e d in the gels, w e compared the intensity of M S E , IEF, a n d N o r t h e r n b a n d s b e t w e e n n o r m a l a n d l e u k e m i c s a m p l e s by densitometric s c a n n i n g . Leukemia Cell Lines. T h e extent of M S E m R N A a n d p r o tein e x p r e s s i o n v a r i e d greatly a m o n g the 2 6 p o s i t i v e c e l l lines. N o r t h e r n blot a n d IEF a n a l y s i s s h o w e d that the steady-state levels of M S E transcripts a n d i s o e n z y m e b a n d s w e r e e l e v a t e d in 16/26 ( 6 2 % ) a n d in 9/25 ( 3 6 % ) c e l l lines, r e s p e c t i v e l y , r e l a tive to n o r m a l p u r i f i e d m o n o c y t e s (Figures 1, 2, 4, a n d 5). W e c o n s i d e r e d a n y a b u n d a n t M S E e x p r e s s i o n as ' o v e r e x p r e s s i o n ' w h e n cases s h o w e d in the d e n s i t o m e t r i c s c a n n i n g at least t w i c e the a m o u n t of N o r t h e r n m R N A or IEF p r o t e i n f o u n d in the n o r m a l u n s t i m u l a t e d m o n o c y t e s . A c c o r d i n g to these c r i teria 16 c e l l lines o v e r e x p r e s s e d M S E m R N A a n d n i n e c e l l I I 2 I 4 H s i UT-7 U-937 ML-2 SKM-1 RW-LEU-4 NB-4 PL-21 OCI-AML-3 Monos JOSK-I Figure 1 A n a l y s i s o f M S E m R N A e x p r e s s i o n in a p a n e l o f l e u k e m i a c e l l l i n e s a n d n o r m a l PB m o n o c y t e s ( M o n o s ) . T o t a l c e l l u l a r R N A f r o m the c e l l l i n e s i n d i c a t e d w a s a n a l y z e d b y N o r t h e r n b l o t t i n g a n d h y b r i d i z e d w i t h t h e H M S E - 1 c D N A p r o b e . T h e M S E m e s s a g e has a s i z e o f 2.0 k b . I n s p e c t i o n o f t h e e t h i d i u m b r o m i d e - s t a i n e d g e l c o n f i r m e d integrity o f the R N A . H y b r i d i z a t i o n w i t h the /3-actin p r o b e w a s u s e d as a n i n t e r n a l c o n t r o l for the l o a d i n g o f s i m i l a r a m o u n t s o f R N A lines o v e r e x p r e s s e d the p r o t e i n . T h e p r o t e i n levels w e r e not c l o s e l y related to m R N A levels in s o m e c e l l lines. T h e levels of p r o t e i n e x p r e s s i o n in seven c e l l lines o v e r e x p r e s s i n g R N A message fell into the range of 8 0 - 2 0 0 % of that of n o r m a l m o n o c y t e s . T h e intensities of the IEF b a n d s of 16 c e l l lines w e r e in the range of 5 0 - 1 7 0 % of those of n o r m a l m o n o c y t e s . L o w M S E e x p r e s s i o n m i g h t be c a u s e d by d e f i c i e n c i e s at v a r i o u s levels, but are m o r e l i k e l y b a s e d o n the relative i m m a turity of the c e l l s , i.e. c e l l s w e r e arrested at d e v e l o p m e n t a l stages w h e r e p h y s i o l o g i c a l l y this g e n e p r o d u c t is not yet expressed. Primary Leukemia Cells. T w o out of the 14 ( 1 4 % ) mRNA- p o s i t i v e cases e x p r e s s e d M S E at levels that w e r e 2 . 8 - 5 . 6 - f o l d h i g h e r than the M S E m R N A levels f o u n d in n o r m a l m o n o c y t e s (Table 1). A b n o r m a l l y h i g h M S E p r o t e i n levels w e r e d e t e c t e d in 3/11 ( 2 7 % ) M S E - p o s i t i v e l e u k e m i c s a m p l e s (range 4 . 4 - 6 . 2 - fold) (Table 1). Induced Expression of MSE Leukemia Cell Lines. In o r d e r to a n a l y z e w h e t h e r M S E e x p r e s s i o n c a n be m o d u l a t e d in vitro, p o s i t i v e a n d negative c e l l lines w e r e s t i m u l a t e d w i t h A T R A , T P A , V i t . D 3 or B r y o 1 a n d LPS + IFN-y. A T R A u p r e g u l a t e d steady-state levels of M S E transcripts in p o s i t i v e c e l l lines (n= 3); T P A w a s not very effective a n d either up- or d o w n r e g u l a t e d , albeit o n l y slightly, the m R N A a n d p r o t e i n levels in p o s i t i v e c e l l lines (n = 4) (Table 3; Figures 6 a n d 7). V i t . D 3 a n d B r y o 1 w e r e not effective in a l t e r i n g the M S E e x p r e s s i o n , neither up- nor d o w n r e g u l a t i o n in p o s i t i v e c e l l lines nor n e w l y i n d u c e d e x p r e s s i o n in negative c e l l lines (HL-60, NB-4). LPS + IFN-y c a u s e d o n l y m i n o r , i n s i g n i f i c a n t c h a n g e s ( < 2 5 % ) in M S E m R N A a n d p r o tein e x p r e s s i o n in seven l e u k e m i a c e l l lines. N e i t h e r A T R A , T P A , nor LPS + IFN-y i n d u c e d n e w M S E transcripts or p r o t e i n in the i n i t i a l l y negative c e l l lines H L - 6 0 , K G - 1 , a n d TI-1. T h e m o r p h o l o g i c a l a p p e a r a n c e of c e l l lines in w h i c h MSE e x p r e s s i o n c o u l d not be i n d u c e d or altered w a s , nevertheless, c l e a r l y m o d i f i e d attesting to the e f f i c i e n c y of the i n d u c e r s Figure 2 E x p r e s s i o n o f M S E p r o t e i n in p r i m a r y m o n o c y t i c l e u k e m i a s a m p l e s (a) a n d in l e u k e m i a c e l l l i n e s (b) in c o m p a r i s o n w i t h n o r m a l PB m o n o c y t e s ( M o n o s ) . E n z y m e s w e r e e x t r a c t e d , s o l u b i l i z e d , s e p a r a t e d b y IEF o n p o l y a c r y l a m i d e gels a n d v i s u a l i z e d b y a - n a p h t h y l a c e t a t e s t a i n i n g . T h e M S E i s o e n z y m e is f o c u s e d as a d i s t i n c t s i n g l e o r d o u b l e b a n d at a b o u t p H 6 . 0 ( i n d i c a t e d b y a r r o w s ) . T h i s b a n d c o u l d b e s e l e c t i v e l y i n h i b i t e d b y N a F (not s h o w n ) . T h e g r o u p o f IEF b a n d s w i t h h i g h e r i s o e l e c t r i c p o i n t s ( p H 6 . 3 - 7 . 9 , the u p p e r b a n d s in t h e figure) h a v e b e e n t e r m e d common esterases ( C o m Est) (9), but a r e e x p r e s s e d i n d e p e n d e n t l y o f the M S E i s o e n z y m e ; c o m p a r e for e x a m p l e i s o e n z y m e patterns o f E O L - 1 , E O L - 3 , j O S K - l , a n d j O S K - K a n d p a t i e n t s #8, #12, a n d # 1 3 . E M - 3 a n d p a t i e n t s #8 a n d #13 are c l e a r l y M S E - n e g a t i v e . A l i q u o t s o f e n z y m e e x t r a c t s f r o m e q u a l n u m b e r s o f c e l l s w e r e s e p a r a t e d b y IEF. T h u s , t h e i n t e n s i t y o f t h e M S E b a n d s c o u l d b e c o m p a r e d r e l a t i v e t o t h e l e v e l o f expression by normal monocytes u s e d : a d h e r e n c e to the plastic flask in T P A - o r B r y o 1-exposed c u l t u r e s ; e n l a r g e m e n t of the c y t o p l a s m a in TPA-, B r y o 1- or A T R A - t r e a t e d c e l l s ; c e l l u l a r aggregation in c u l t u r e s w i t h LPS. Normal Monocytes. E x p o s u r e of n o r m a l m o n o c y t e s to LPS + IFN-y e n h a n c e d b o t h M S E m R N A a n d p r o t e i n levels b y a factor of 1.5-2. C u l t u r e in serum-free m e d i u m (M-SFM) w i t h o r w i t h o u t A T R A s h o w e d a d o w n r e g u l a t i o n of M S E m R N A e x p r e s s i o n in n o r m a l m o n o c y t e s to 2 0 % at 4 8 h, 1 % at 72 h a n d 0 . 3 % at 9 6 h of the c o n t r o l v a l u e s at 0 h, r e s p e c t i v e l y . T h u s A T R A w a s not effective. Characterization Half-Life of MSE of the MSE mRNA. Gene T h e half-life (f*) of the M S E t r a n - script w a s d e t e r m i n e d by i n c u b a t i n g the JOSK-l, NOMO-1 a n d P L B - 9 8 5 c e l l s in the p r e s e n c e of the t r a n s c r i p t i o n i n h i b i t o r a c t i n o m y c i n D. T h e h of M S E m R N A w a s a b o u t 5-6 h. Single Gene and Gene Amplification. G e n o m i c D N A of the c e l l lines JOSK-l, K G - 1 , M O B S - 1 , N B - 4 , N O M O - 1 , O C I A M L - 2 , OCI-AML-3, PLB-985, SKM-1, T A H R - 8 7 , THP-1, and UT-7 w e r e d i g e s t e d w i t h the restriction e n z y m e s EcoRI, H/ndlll or Psfl w h i c h h a v e c l e a v a g e sites in the h u m a n M S E g e n e (16) a n d p r o b e d w i t h the HMSE-1 c D N A o r w i t h a 2 3 8 b p fragment f r o m the 5'-end (nt - 1 0 - 2 2 8 , o b t a i n e d after Bamhl d i g e s t i o n a n d e x t r a c t i o n f r o m the gel) of the HMSE-1 c D N A . G e n o m i c D N A f r o m different c e l l lines cut w i t h the s a m e e n z y m e (HindWl) s h o w e d i d e n t i c a l b a n d i n g patterns in S o u t h e r n blots (Figure 8); the intensities of the v a r i o u s b a n d s w e r e e q u a l or v e r y s i m i l a r in all c e l l lines despite the fact that these c e l l lines t r a n s c r i b e d q u i t e different a m o u n t s of m R N A . 3 82- 1 1 1 1 wmmmm 1727 MSE-PI MSE H H H H 506-526 940-960 CDNA MSE-P4 1506-1526 PCR p r o d u c t 868 bp t H J] J) 5 5 u S S o - ^ r» co ^ _ ^ 5 x>oPFHOiSSooa<)4SoSl2S§uuoSu^ MSE - - 8 6 8 -2000 - 1600 - 1000 A c t i n -* 00 1 S; > 6 o so * a. 41 9 s 1" 1/3 O t R - j S 9 < I S e OS 2 x rfS MSE MSE • Figure 3 RT-PCR analysis of MSE transcripts in leukemia-lymphoma cell lines using ethidium bromide staining and hybridization after Southern blotting with the HMSE-1 c D N A probe, (a) Schematic diagram of the HMSE-1 c D N A showing the primers MSE-P1 and -P2 used for RTPCR detection of MSE m R N A and the primers MSE-P1 through -P4 employed for D N A sequencing, (b) Agarose gel electrophoresis of the PCR products (868 bp) amplified using primer pair P1/P2 in a 32-cycle PCR. Molecular size markers were run in the outside lane (denoted as 1 kb ladder). Lane marked H 0 without template R N A represents the negative control. PCR products of the same RT reaction using /3-actin primers were used as controls for the quality of the R N A and successful PCR amplification. The cell lines OCI-AML-3 and RW-LEU-4 are here negative which might have been caused by insufficient reverse transcription and/or amplification (see the weak actin band); on repeated experiments these two cell lines were clearly positive, (c) The products were transferred to nylon membranes by the method of Southern and hybridized with the HMSE-1 probe. Compare the weak expression in lymphoid cell lines (e.g. EHEB, REH) vs. the strong signals in monocytic cell lines (e.g. RW-LEU-4) 2 \JOSK- o s ^ Figure 4 O v e r e x p r e s s i o n o f M S E m R N A i n t h e c e l l l i n e j O S K - l a n d t h e p a t i e n t #1 i n c o m p a r i s o n w i t h n o r m a l P B m o n o c y t e s ( M o n o s ) (left). P a t i e n t #8 is c l e a r l y n e g a t i v e . T h e filter w a s r e h y b r i d i z e d w i t h a j3-actin c D N A p r o b e . Laser d e n s i t o m e t r i c s c a n n i n g a l l o w e d f o r q u a n t i f i c a t i o n of t h e results (right) EM-3 ML-2 NB-4 EOL-3 U-937 64 MV4-11 PL-21 72 ioo Monos EOL-1 M 52 108 100 119 12a PLB-985 RW-LEU-4 TK-1B JOSK-M OCI-AML-2 X-376 MONO-MAC-6 MOBS-1 KBM-5 JOSK-K THP-1 JOSK-S KBM-3 SKM-1 OCI-AML-3 UT-7 JOSK-l NOMO-1 % of normal Monos % of normal Monos Figure 5 O v e r e x p r e s s i o n o f M S E m R N A a n d p r o t e i n i n l e u k e m i a c e l l l i n e s . T h e i n t e n s i t y o f t h e b a n d s o n N o r t h e r n b l o t s a n d IEF gels w e r e m e a s u r e d b y laser d e n s i t o m e t r y a n d r e l a t e d to t h e v a l u e s f o u n d f o r n o r m a l P B m o n o c y t e s ( M o n o s ) w h i c h w e r e set as 1 0 0 % . O v e r e x p r e s s i o n w a s d e f i n e d as 2 0 0 % o r h i g h e r o f t h e m R N A o r p r o t e i n l e v e l s o f t h e M o n o s . T h u s , 1 6 / 2 6 a n d 9/25 l e u k e m i a c e l l l i n e s o v e r e x p r e s s e d M S E m R N A a n d p r o t e i n , r e s p e c t i v e l y (EM-3 w a s m R N A + , b u t p r o t e i n - n e g a t i v e ) . T h e l e v e l s o f s i g n a l s f r o m d i f f e r e n t b l o t s o r gels w e r e n o t c o m p a r e d w i t h t h e l e v e l s f r o m o t h e r e x p e r i m e n t s as d i f f e r e n t e x p o s u r e t i m e s o r s t a i n i n g p e r i o d s m i g h t h a v e b e e n u s e d ; i n s t e a d , p o s i t i v e c o n t r o l s t a n d a r d s (jOSK-1 a n d M o n o s ) w e r e i n c l u d e d t o w h i c h t h e d e n s i t o m e t r y d a t a w e r e r e l a t e d . (•), m R N A ; (•), p r o t e i n Treatment Cell L\nes C h a n g e s in E x p r e s s i o n " a m R N A (%) Protein (%) ATRA HL60, KG-1 TI-1 KBM-3 MONO-MAC-6 NB-4 Remained negative +82 + 241 +427 Remained negative + 158 +43 +310 TPA HL-60, KG-1, TI-1 EOL-1, M O N O - M A C - 6 , NB-4 KBM-3 Remained negative < + 25 -37 Remained negative < + 25 -53 LPS + IFN-y normal monocytes EM-3 HL-60 JOSK-S, ML-2, M O N O - M A C - 6 , NB-4, THP-1, U-937 + 111 -25 Remained negative <±25 ND Remained negative Remained negative <±25 ND, not done. ^Cells were e x p o s e d to 10 M A T R A , 10 M TPA or 100 ng/ml L P S + 200 U/ml IFN-y; ATRA- or TPAtreated cells were cultured for 96 h; R N A and protein of LPS-treated cells were harvested after 4 h and 24 h, respectively. There were no c h a n g e s in M S E expression in cell lines cultured continuously in their respective media; however, culture of normal monocytes for 96 h led to a clear downregulation of M S E m R N A expression. " C h a n g e s in M S E expression c o m p a r e d with the respective untreated control cells as a s s e s s e d by densitometric scanning of the b a n d s on the Northern blots or IEF gels. 7 7 ATRA TPA LPS + IFN-7 Figure 6 E x p r e s s i o n o f M S E m R N A d u r i n g t r e a t m e n t o f NB-4 w i t h 1 0 " M A T R A , o f M O N O - M A C - 6 w i t h 10 M T P A , a n d o f U-937 w i t h 100 ng/ml L P S + 200 U / m l I F N - y for t h e t i m e c o u r s e s i n d i c a t e d . N o t e t h e M S E u p r e g u l a t i o n in NB-4 (an a b o u t 5-fold i n c r e a s e ) o v e r 72 h o f A T R A - t r e a t m e n t a n d t h e l a c k o f a n y s i g n i f i c a n t c h a n g e s i n M O N O - M A C - 6 a n d U-937. L o n g e r e x p o s u r e to L P S + I F N - y (up to 10 h) a l s o d i d not p r o d u c e a n y m a j o r c h a n g e s 7 7 T h e fragments seen after restriction w i t h EcoRl o r H/ndlll w e r e the m e t h y l a t i o n - s e n s i t i v e c o n s i s t e n t w i t h the g e n e m a p p u b l i s h e d p r e v i o u s l y (16). T h e s e schizomer d a t a i n d i c a t e the p r e s e n c e of a s i n g l e c o p y M S E g e n e in the i=Cfo\). h u m a n g e n o m e a n d a r g u e against a n y g e n e a m p l i f i c a t i o n as o n l y if the internal c y t i d i n e is u n m e t h y l a t e d , Msp\ w i l l cut the causing high M S E m R N A expression. s a m e s e q u e n c e i r r e s p e c t i v e of the m e t h y l a t i o n status of the enzyme Msp\ enzyme and /-/pall, its i n s e n s i t i v e iso- the W h e r e a s H p a l l a n d Hha\ sensitive enzyme cut the s e q u e n c e n u c l e o t i d e s . N o d i f f e r e n t i a l restriction patterns of HpaU, Hha\ CCGG Msp\ o r Hha\ w e r e d e t e c t e d b e t w e e n the three c e l l lines 6 9 7 , HLDNA Methylation. determined in D i f f e r e n c e s in D N A m e t h y l a t i o n w e r e cell lines with different degrees of e x p r e s s i o n : 6 9 7 (negative in R T - P C R , N o r t h e r n , IEF); (RT-PCR + , N o r t h e r n - a n d lEF-negative); MSE HL-60 6 0 , and PLB-985 suggesting that d e m e t h y l a t i o n of c y t i d i n e residues in the s e q u e n c e C p G of the M S E g e n e is not c o r r e lated w i t h its e x p r e s s i o n . P L B - 9 8 5 (RT-PCR + , N o r t h e r n + , IEF + ). For S o u t h e r n blots a n d h y b r i d i z a t i o n w i t h the H M S E - 1 p r o b e , D N A w a s restricted to c o m p l e t i o n w i t h Expression in Various Species. T o detect s e q u e n c e s h o m - 2 u 2 2 2 < < < u JZ SO OS 9 Figure 7 E x p r e s s i o n o f M S E p r o t e i n in the N B - 4 l e u k e m i a c e l l l i n e e x p o s e d to 1 0 N B - 4 c e l l s w i t h A T R A u p r e g u l a t e d the M S E p r o t e i n e x p r e s s i o n (arrow) a b o u t 4-fold o l o g o u s to M S E in other o r g a n i s m s , S o u t h e r n blot a n a l y s i s of h u m a n , hamster, p o r c i n e , b o v i n e , fish, a n d insect D N A w a s p e r f o r m e d u s i n g H/ndlll as restriction e n z y m e a n d the H M S E 1 c D N A as p r o b e (Figure 9). W h i l e u n d e r c o n d i t i o n s of h i g h s t r i n g e n c y a n u m b e r of discrete b a n d s w e r e seen in all m a m m a l i a n s a m p l e s , n o h y b r i d i z a t i o n to fish or insect D N A w a s d e t e c t e d i n d i c a t i n g that the M S E s e q u e n c e s are c o n s e r v e d in the m a m m a l i a n g e n o m e s . Rearrangements and Point Mutations. G i v e n the apparent M S E g e n e o v e r e x p r e s s i o n in a n u m b e r of m o n o c y t e - d e r i v e d c e l l lines w e used P C R - S S C P in o r d e r to detect a n y g e n o m i c gross alterations or p o i n t m u t a t i o n s . P C R - S S C P w a s p e r f o r m e d o n s a m p l e s f r o m n o r m a l PB m o n o c y t e s a n d f r o m the c e l l lines JOSK-l, KB-3-1, N B - 4 , N O M O - 1 , a n d U - 9 3 7 . T h e H E L A d e r i v a t i v e c e l l l i n e KB-3-1 w a s e x a m i n e d as w e f o u n d p r e v i o u s l y that these c e l l s e x p r e s s e d a s i g n i f i c a n t l y shorter t r u n c ated transcript (about 1.4 k b vs. n o r m a l l y 2.0 kb) (10). T h e s a m e m i g r a t i o n patterns of the m a j o r b a n d s w e r e f o u n d for the six s a m p l e s . In the region of the m i n o r b a n d s the PB m o n o cytes a n d the KB-3-1 c e l l s r e v e a l e d differently m i g r a t i n g fragments. T o e l u c i d a t e the nature of these S S C P patterns in m o r e detail w e s e q u e n c e d the c D N A o b t a i n e d by reverse t r a n s c r i p t i o n u s i n g an a u t o m a t e d s e q u e n c e r a n d the four primers MSEP1 to -P4 (Figure 3a). N o p o i n t m u t a t i o n s w e r e d e t e c t e d w i t h i n the first 1 5 2 6 nt of the o p e n r e a d i n g f r a m e . A c o m p a r i son of the s e q u e n c e s p u b l i s h e d by other investigators f r o m the l e u k e m i a c e l l l i n e U - 9 3 7 (2) a n d a l v e o l a r m a c r o p h a g e s (17) w i t h o u r data s h o w e d a differential o c c u r r e n c e of a n u c l e o t i d e triplet in the v a r i o u s s a m p l e s . T h i s triplet e n c o m p a s s e d nt 8 9 2 - 8 9 4 ( C A G c o d i n g for the neutral p o l a r a m i n o a c i d g l u t a m i n e ) . W h i l e the c e l l l i n e U-937 s t u d i e d e l s e w h e r e (2) a n d o u r KB-3-1 l a c k e d the triplet, these n u c l e o t i d e s w e r e p r e sent in the a l v e o l a r m a c r o p h a g e s (17), the PB m o n o c y t e s , the c e l l lines JOSK-l, N B - 4 , N O M O - 1 , a n d in o u r U - 9 3 7 . 7 M A T R A for the t i m e p e r i o d s i n d i c a t e d . T r e a t m e n t o f DISCUSSION It has b e e n asserted that h u m a n M S E s h o u l d be o n e of the f e w e x a m p l e s of a h e m a t o p o i e t i c lineage-specific e n z y m e (9). H e r e , w e s h o w e d that M S E e x p r e s s i o n w a s i n d e e d restricted to c e l l s d e r i v e d f r o m the m o n o c y t i c l i n e a g e at the p r o t e i n a n d m R N A level w h e n u s i n g IEF a n d standard N o r t h e r n b l o t t i n g , respectively. A p p l y i n g the e x t r e m e l y sensitive m e t h o d of P C R , m o r e than half of the l y m p h o i d l e u k e m i a a n d l y m p h o m a c e l l lines that w e r e negative in the N o r t h e r n analysis d i s p l a y e d M S E e x p r e s s i o n as w e l l . P C R - a m p l i f i e d p r o d u c t s w e r e e x a m i n e d by direct v i s u a l i z a t i o n in e t h i d i u m b r o m i d e s t a i n i n g after gel e l e c t r o p h o r e s i s . Southern blotting, h y b r i d i z a t i o n w i t h the HMSE-1 p r o b e (thus c o n f i r m i n g the s p e c i f i c i t y of the P C R products), a n d e x t e n d e d a u t o r a d i o g r a p h i c e x p o s u r e a d d e d a n o t h e r o r d e r of m a g n i t u d e of sensitivity. T h u s , the use of current RT-PCR t e c h n o l o g y reflecting an e x t r e m e l y e l e v a t e d level of t e c h n i c a l sensitivity is necessary to detect M S E message in l y m p h o i d c e l l s . Possibly, u s i n g nested p r i m e r s a n d a s e c o n d r o u n d of P C R might s h o w e v e n m o r e M S E - p o s i t i v e l y m p h o i d c e l l lines. D e s p i t e the frequent e x p r e s s i o n of M S E by l y m p h o i d c e l l lines, 'truly m o n o c y t i c ' c e l l lines c o u l d be r e a d i l y d i s t i n g u i s h e d by their 1 0 - 5 0 - f o l d h i g h e r message intensity. m R N A trace e x p r e s s i o n (defined as RT-PCR + , Northern-negative) w a s never p a r a l leled by protein e x p r e s s i o n , at least not o n e that w a s v i s i b l e in the IEF g e l . Future studies o n the r e g u l a t i o n of this gene m i g h t e l u c i d a t e the r o l e , if any, of M S E m R N A trace e x p r e s s i o n in the a b s e n c e of a n y s i g n i f i c a n t p r o t e i n p r o duction. T h e lack of M S E p r o t e i n or m R N A (Northern) e x p r e s s i o n in s o m e m o n o c y t e - d e r i v e d c e l l lines a n d p r i m a r y s a m p l e s might be e x p l a i n e d as f o l l o w s : (i) an i n h e r i t a b l e m o n o c y t e esterase d e f i c i e n c y w i t h an a u t o s o m a l d o m i n a n t m o d e of t r a n s m i s s i o n has b e e n reported r e c e n t l y ; the i n c i d e n c e s w e r e 0 . 8 % , 1 . 7 % , a n d 3 . 9 % for n o r m a l i n d i v i d u a l s a n d for patients w i t h either n o n - m a l i g n a n t or m a l i g n a n t diseases, respectively (18); (ii) a differentiation ( C F U - M , monoblast, p r o m o n o c y t e , monocyte) at w h i c h the c e l l s b e g i n to t r a n s c r i b e the M S E g e n e p h y s i o logically. Previous 90/146 (62%) which o (78%) studies d e t e c t e d the M S E IEF band p r i m a r y M 4 a n d M 5 cases ( r e v i e w e d in is s i m i l a r to the i n c i d e n c e s f o u n d here, at the p r o t e i n a n d 14/20 ( 7 0 % ) respectively. i.e. at the m R N A in (3)) 11/14 level, In a series of e x p e r i m e n t s w e sought to d e t e r m i n e w h e t h e r the M S E p r o t e i n a n d m R N A e x p r e s s i o n c o u l d be m o d u l a t e d in several c e l l lines u s i n g a p a n e l of p h a r m a c o l o g i c a l and p h y s i o l o g i c a l b i o r e g u l a t o r s , i.e. the P K C activators T P A and Bryo 1, the vitamin analogues A T R A a n d D 3 , a n d L P S + IFN-y. T h e results c a n be s u m m a r i z e d as f o l l o w s : (i) n o n e of these reagents c o u l d i n d u c e p r o t e i n or m R N A e x p r e s s i o n in a n y of the M S E - n e g a t i v e c e l l l i n e s ; (ii) A T R A u p r e g u l a t e d M S E t r a n scription and p r o t e i n synthesis in p o s i t i v e c e l l lines; (iii) neither T P A or Bryo 1 had significant effects; (iv) L P S + IFN-y s t i m u l a t e d M S E e x p r e s s i o n in n o r m a l PB m o n o c y t e s , but d i d not c a u s e s i g n i f i c a n t c h a n g e s in g e n e e x p r e s s i o n in some s e v e n c e l l lines. Further studies o n the effect of A T R A o n M S E e x p r e s s i o n w i l l n o d o u b t be i n f o r m a t i v e w i t h respect to the regulatory m e c h a n i s m s of this g e n e . A s d o c u m e n t e d p r e v i o u s l y , there is a c o n s i d e r a b l e v a r i a - 3.0 1.6 b i l i t y in the s t a i n i n g intensities of M S E in l e u k e m i c c e l l s (19). T h e c o m p a r i s o n of b a n d s f r o m n o r m a l PB m o n o c y t e — popu- lations w i t h laser d e n s i t o m e t r i c s c a n n i n g s h o w e d that a c e r - tain p e r c e n t a g e of the m o n o c y t i c l e u k e m i a s a m p l e s e x p r e s s e d i n c r e a s e d levels of this i s o e n z y m e . W e e x t e n d e d these o b s e r - v a t i o n s at the m R N A a n d p r o t e i n l e v e l ; N o r t h e r n blot a n a l y s i s c o n f i r m e d that steady-state levels of M S E transcripts were e l e v a t e d relative to n o r m a l m o n o c y t e s (in 1 4 % a n d 6 2 % of the Figure 8 R e s t r i c t i o n p a t t e r n o f the M S E g e n e in h i g h m o l e c u l a r w e i g h t D N A i s o l a t e d f r o m s e v e r a l M S E m R N A - p o s i t i v e a n d -negative l e u k e m i a c e l l l i n e s . A f t e r e n d o n u c l e a s e d i g e s t i o n w i t h HindUl the D N A f r a g m e n t s w e r e s e p a r a t e d b y p u l s e d f i e l d gel e l e c t r o p h o r e s i s , S o u t h e r n b l o t t e d , a n d h y b r i d i z e d to the H M S E - 1 p r o b e . T h e s i z e s o f the b a n d s are s p e c i f i e d in t h e f i g u r e . T h e b a n d s f r o m a l l c e l l l i n e s h a v e a p p r o x i m a t e l y t h e s a m e i n t e n s i t y ; t h e r e w e r e n o gross a l t e r a t i o n s o f the r e s t r i c t i o n patterns primary and continuously cultured leukemias, r e s p e c t i v e l y ) ; IEF s h o w e d that a large f r a c t i o n of M S E - p o s i t i v e l e u k e m i a s w e r e d i s t i n g u i s h e d , in q u a n t i t a t i v e terms, by o v e r a b u n d a n c e of M S E vivo an p r o t e i n (in 2 7 % a n d 3 6 % of the in a n d in vitro l e u k e m i a s , respectively). A s all the e n z y m e extracts w e r e p r e p a r e d f r o m the s a m e n u m b e r of c e l l s a n d as i d e n t i c a l q u a n t i t i e s of total R N A w e r e a n a l y z e d , c l e a r l y o v e r e x p r e s s i o n of the M S E g e n e a p p e a r s to o c c u r . an T o d e t e r m i n e w h e t h e r g e n o m i c alterations might be r e s p o n - s i b l e for h i g h e x p r e s s i o n , g e n o m i c D N A of negative c e l l lines a n d c e l l lines e x p r e s s i n g n o r m a l or o v e r a b u n d a n t levels of M S E w e r e s u b j e c t e d to Sothern blot a n a l y s i s . N o gross alter- m i s d i a g n o s i s (i.e. a c u t e m y e l o i d l e u k e m i a w i t h o u t a m o n o cytic component vs. acute myelomonocytic/monocytic l e u k e m i a ) of the cases f r o m w h i c h the c o n t i n u o u s c e l l lines h a d b e e n e s t a b l i s h e d a n d of o u r fresh l e u k e m i a s a m p l e s c a n not be e n t i r e l y e x c l u d e d ; r e g a r d i n g o u r p r i m a r y l e u k e m i a s p e c i m e n s the e l i g i b i l i t y c r i t e r i a i n c l u d e d o n l y cases that w e r e C D 1 4 + a n d b e l o n g e d m o r p h o l o g i c a l l y to the F A B categories M 4 or M 5 ; w i t h regard to the c e l l lines w e w e r e left to rely o n the o r i g i n a l p u b l i c a t i o n s d e t a i l i n g the features of the s e e d i n g m a t e r i a l ; (iii) s o m e c e l l lines a p p e a r to h a v e lost c h a r a c t e r i s t i c features still f o u n d o n the o r i g i n a l c e l l s , e.g. most c o n t i n u o u s m o n o c y t e - d e r i v e d c e l l lines are n o l o n g e r C D 1 4 + d e s p i t e strong e x p r e s s i o n of this surface m a r k e r o n the initial p o p u lation (12); s i g n i f i c a n t d i f f e r e n c e s b e t w e e n c e l l lines a n d the r e s p e c t i v e p r i m a r y c e l l s w e r e reported for other surface a n t i gens, m o r p h o l o g i c a l a p p e a r a n c e , etc. (11); (iv) this 'dediffere n t i a t i o n ' d u r i n g the e s t a b l i s h m e n t of the c e l l lines m i g h t h a v e led to a n arrest at a m o r e i m m a t u r e stage of d i f f e r e n t i a t i o n a n d s o m e of the freshly e x p l a n t e d l e u k e m i c c e l l s m i g h t c o r r e s p o n d to rather i m m a t u r e n o r m a l c o u n t e r p a r t s ; it w i l l be interesting to assign by in situ h y b r i d i z a t i o n the p r e c i s e stage of ations of the M S E g e n e w e r e d e t e c t e d in these s a m p l e s , a r g u - i n g against a p o s s i b l e a m p l i f i c a t i o n or rearrangement of the g e n e a n d suggesting, instead, i n c r e a s e d e x p r e s s i o n of a struc- turally u n a l t e r e d g e n e . A n a l y s i s of M S E g e n o m i c D N A , reverse transcribed D N A , mRNA, and protein revealed identically s i z e d b a n d s a n d the s a m e i s o e l e c t r i c p o i n t s , r e s p e c t i v e l y , for all n o r m a l a n d fresh or c u l t u r e d m a l i g n a n t c e l l s i n d i c a t i n g that a n y a b n o r m a l i t i e s d i d not result f r o m d i f f e r e n c e s in the gross D N A , R N A , or p r o t e i n structures. T h e n , a two-step strategy b a s e d o n P C R - S S C P a n d PCR- d i r e c t e d s e q u e n c i n g w a s used to d e f i n e a n y m i n u t e alterations or p o i n t m u t a t i o n s of the g e n e . W h i l e n o p o i n t could be detected in the cDNA, sequence mutations comparison b e t w e e n p u b l i s h e d data a n d o u r results u n v e i l e d the p r e s e n c e of a base triplet ( C A G at nt 8 9 2 - 8 9 4 c o d i n g for g l u t a m i n e ) in o u r n o r m a l a n d m a l i g n a n t s p e c i m e n s a n d the lack of these n u c l e o t i d e s in the U-937 d e r i v e d HSSE-1 s e q u e n c e (2) a n d in a H e L a - s u b c l o n e aberrantly e x p r e s s i n g this g e n e . T h e s i g n i f i - c a n c e of this f i n d i n g is u n c l e a r at the present t i m e ; it might possibly represent an insignificant p o l y m o r p h i s m . In any event, in o u r U - 9 3 7 these n u c l e o t i d e s w e r e c l e a r l y present. Figure 9 C o n s e r v a t i o n o f the M S E g e n e in m a m m a l i a n s p e c i e s . G e n o m i c D N A f r o m c e l l l i n e s o f d i f f e r e n t s p e c i e s w a s c u t w i t h H/ndlM, sizes e p a r a t e d b y a g a r o s e g e l e l e c t r o p h o r e s i s , S o u t h e r n b l o t t e d a n d h y b r i d i z e d w i t h the H M S E - 1 p r o b e . T h e c e l l l i n e s u s e d w e r e as f o l l o w s : A M C 6 S C 8 ( p o r c i n e k i d n e y ) , B H K - 2 1 (hamster k i d n e y c e l l s ) , D-11 ( r a i n b o w trout liver), K N R - 0 2 8 ( b o v i n e e m b r y o n a l k i d n e y ) , M B - 0 2 0 (insect, c a b b a g e m o t h larvae), O C I - A M L - 2 ( h u m a n A M L M 4 ) Precisely what the m e c h a n i s m s are that led to overabundant levels of M S E m R N A a n d protein is o p e n to further experiments, but our preliminary analysis has already e x c l u d e d s o m e possibilities. It remains to be determined whether the high proportion of blast cells overexpressing M S E is related to an a b n o r m a l regulation of the M S E gene d u e to the l e u k e m i c process (possibly caused by alterations, e.g. point mutations, in regulatory elements c o n t r o l l i n g the level of gene expression) or is triggered by a m o r e p h y s i o l o g i c a l m e c h a n i s m already present in normal cells. In other w o r d s , does the M S E overexpression reflect an abnormality or a process that is normal for a particular stage of m o n o c y t e differentiation or activation? Cross-reactivity w a s f o u n d w i t h other m a m m a l i a n s p e c i e s suggesting that the M S E gene is e v o l u t i o n a r i l y c o n s e r v e d . T h e lack of e x p r e s s i o n in m a n y other h u m a n c e l l types (urinary b l a d d e r , k i d n e y , breast, s k i n , c e r v i x , o v a r y , a n d c o l o n ) (10) favors an e x c l u s i v e role in the h e m a t o p o i e t i c system. A n a l y s i s of D N A m e t h y l a t i o n of the M S E gene d i d not s h o w differential restriction patterns of methylation-sensitive restriction e n z y m e s b e t w e e n M S E - p o s i t i v e a n d -negative c e l l lines sug- g e s t i n g that d e m e t h y l a t i o n of c y t i d i n e r e s i d u e s is not c o r r e lated w i t h M S E e x p r e s s i o n . W h i l e a great d e a l of i n f o r m a t i o n a b o u t the e x p r e s s i o n of MSE has b e e n a c c u m u l a t e d in the present a n d p r e v i o u s s t u d - ies, o n l y l i m i t e d i n f o r m a t i o n has b e e n g a t h e r e d a b o u t (i) the c e l l u l a r f u n c t i o n of M S E , a n d (ii) its r e g u l a t i o n in c e l l s . W i t h respect to the first i s s u e , p r o g r e s s has been slow, b e c a u s e the p h y s i o l o g i c a l substrate for this e n z y m e in part remains unknown. Further s t u d i e s o n t h e m e c h a n i s m s b y w h i c h this g e n e is regulated should macrophage lead to differentiation new insights and function. r e g u l a t o r s , e.g. t r a n s c r i p t i o n f a c t o r s , o f t h e into monocyte- Identification MSE gene of is a p r i m e o b j e c t i v e of f u t u r e s t u d i e s . O v e r e x p r e s s i o n o f this g e n e b y t r a n s f e c t i o n s h o u l d e n a b l e us to p r o v i d e further a n s w e r s o n the up- a n d d o w n r e g u l a t i o n of M S E mRNA and protein during activation, proliferation, and differentiation of m o n o c y t e s - m a c r o p h a g e s . 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