CURRICULUM VITAE (2015 January) Name: Surname: Term address: Home address: Nationality: Passport: Sex: E-mail : Phone: Carlos Noceda Alonso EU Marie Curie Chair Instituto de Ciências Agrárias e Ambientais Mediterrânicas (ICAAM) Laboratory of Molecular Biology-University of Évora Apartado 94, 7002-554 Pólo de Mitra, Évora, Portugal Navarro-Campo Iglesia-Casas Carr., 17 33490 Avilés (Asturias). Spain Spain AD706202 male [email protected] (+34) 606953023, (+351) 963320884 DRIVING LICENCE Class B (for cars) from 13.01.1984 Disposure for travelling RESEARCH INTERESTS I am a plant molecular biologist with experience in tissue culture. My education (PhD in Biology and MSc in Plant Biotechnology) and international research experience have provided me a broad understanding of plant cellular, molecular and evolutionary biology. This covers genetic, epigenetic, transcriptional and biochemical studies on developmental biology and (epi)genetic variation, frequently with the applied aim of improving plant cultures. My recent researches deal with molecular studies of developmental stages and search of functional markers of stress resistance, frequently from an evolutionary approach. My main goal from here onwards is to use all that knowledge to go more deeply into eco-evo-devo mechanisms, and, if possible, to use the arising information for applied purposes. I am sure that my background not only will be adaptable to the objectives of your institution, but also will provide additional approaches. Since the period of my PhD very often in my career I had to spend time setting up different methodologies from the beginning of the researches, always with success to be used for experimentation or analysis. For example, in my initial researches in plant biology at the Plant Biotechnology Institute of Santa Clara (Cuba) –developed as a grant holder from the Spanish International Cooperation Agency– I had to deal with unknown factors affecting propagation and quality of plant field and in vitro cultures. During several years, always under fundamental and practical approaches, I studied distinct molecular profiles –metabolites, released proteins, isozymes- in different plant developmental processes to find biochemical indicators and characterizations of morphogenetic capacities and physiological stages, and to establish associations with variant genomic (AFLPs, functional markers) and epigenomic (MSAPs) molecular markers. In this way, at the University of Oviedo (Spain) we found an inverse relationship between pine genetic potential for somatic embryogenesis and both global genomic methylation and polyamine contents. Nevertheless, these and other molecular associations were found to do not exist regarding the typical loss of embryogenic ability with ageing of the cultures of several pine genotypes, in a study in which I took actively part at Canadian Forest Service-Québec under the supervision of Dr. Krystina Klimaszewska. Subsequently, I went into detail analysing more treatments with respect to genome methylation changes, especially at INRA-Orléans (France), but results are still being processed. Those studies on genome methylation regarded percentage of methyalted cytosines and methylation patterns. I also participated in the development and validation of a plantain micropropagation method in a European Union research project for International Cooperation, which main researcher was Prof. Pierre Debergh, from the University of Gent. In addition to biotechnological work, my role there consisted mainly in the molecular assessment of field regenerants, performing karyotypic, genomic and epigenomic analyses to follow culture-induced morphological somaclonal variation. We found an AFPL marker associated to dwarfism. In that time I also cooperated in the molecular characterization of artificial banana/plantain hybrid lines. From recently I worked at the University of Évora (Portugal), under the supervision of Profs. Birgit Arnholdt-Schmitt and Augusto Peixe. Here I continued working on my interests around epigenetics, thus starting a research on developmental and evolutionary involvement of the changing structures of the genome. From this perspective I studied, for example, variations in number of DNA repeats under distinct culture conditions and in different plant tissues and individuals. Keeping an eye on evolutionary approaches, I also have searched for functional markers of plant stress resistance, so important in fitness and consequently highly linked to the evolution, especially of reproductive systems. My current work consists in the study of the differential regulation of gene expression (by RT-qPCR) during morphogenetic processes in plants with different potential for adaption, with an emphasis in the alternative oxidase function and genes, which are involved in physiological adaptations to biotic and abiotic stresses. Currently I´m a Prometeo (Senescyt, Ecuador) researcher on molecular basis of somatic embryogenesis of banana and coffee tree. During all those researches I have acquired expertise in the use of bioinformatic platforms and tools to analyse nucleic acid and protein sequences, having also a basis in biostatistics. In spite my research work was mainly performed under a plant-biotechnology basis, I have also worked in physiology and pathology of fishes and mammals. Furthermore, my formation in sciences is not reduced to Biology, since I studied several university courses on Physics and, furthermore, I taught sciences (Mathematics, Physics, Chemistry, Biology) at high school and university levels. The above mentioned stances abroad, so as international meetings and writing of scientific papers have provided me a good level of spoken and written English, so as a basic level of Portuguese and French, being Spanish my mother language. My communication skills have increased with activities such as national and overseas pre-graduate and postdoctoral researcher training and supervision, and management of projects. It is also worth to say here that I obtained the Pedagogical Attitude Certificate awarded by the Spanish Institute of Educational Sciences. I am highly interested in put in practise my knowledge and skills and co-operate in the emergent development of science in Ecuador, hereby contributing to the social welfare which is expected from the current politics. Summarizing, initiatives for working in universities or research centres of Ecuador, like contracts or the Prometeo project, perfectly suits my professional and personal interests, and I would fill very comfortable in the work. WORK EXPERIENCE (EMPLOYMENT) Research/Academy Participation in research projects - Current: “Caracterización de alteraciones moleculares que originan variación somaclonal” Prometeo consultant (2014 Feb-2015 Feb). Centro de Investigaciones Biotecnológicas del Ecuador (CIBE)- Escuela Superior Politécnica del Litoral (ESPOL). Guayaquil. Ecuador. Main Reseracher: Esther Lilia Peralta Standardization of methods for estimation of (epi)genetic variability on the basis of observed molecular changes. Applications in optimization of micropropagation protocols. - “Adventitious rooting in olive cuttings: a physiological response under oxidative stress?” Postdoctoral researcher (2012 May-2013 Dec) Instituto de Ciências Agrárias e Ambientais Mediterrânicas (ICAAM). Laboratory of Molecular Biology and Laboratory of Phytotechnics-University of Évora. 7002-554 Évora, Portugal Main researcher: Augsuto Peixe Study of the regulation of gene expression during plant morphogenetic processes -mainly rooting-, with an emphasis in their control by the alternative oxidase function and genes, which are involved in physiological adaptations to biotic and abiotic stresses. Measurements of respiratory enzyme capacities, use of bioinformatic tools and platforms; nucleic acid extractions, (RT)-PCR, electrophoresis; DNA fragment purifying, cloning and sequencing; data analyses and evaluation. - “Characterization of alternative oxidase (AOX) polymorphisms in Hypericum perforatum L. – A novel approach to advance breeding on yield stability in a medicinal plant” Researcher (2011 May-2012 Apr) EU Marie Curie Chair. Instituto de Ciências Agrárias e Ambientais Mediterrânicas (ICAAM). Laboratory of Molecular Biology-University of Évora. 7002-554 Évora, Portugal Main researcher: Birgit Arnholdt-Schmitt ([email protected]) Study of developmental and evolutionary involvement of the changing structures of the genome: e.g., variations in number of DNA repeats. Setting up of molecular biology techniques (Southern blotting). PCRs. Study of the contribution of 3'-UTR of genes to gene and mRNA function, and possible implications in the search for functional markers. Keeping an eye on evolutionary approaches, search for functional markers of plant stress resistance. Standardization of a method for in vitro culture of H. perforatum in order to serve as a model for biological assays and molecular analyses. - “Evolution de la méthylation de l’ADN de lignées embryogènes de pin maritime au cours du processus de multiplication conduisant à la perte progressive de leur capacité de maturation” Postdoctoral CDD contract (2009 Mar - Dec ). Unité Amélioration, Génétique et Physiologie Forestières. *Institut National de la Recherche Agronomique (INRA), 2163 Avenue de la Pomme de pin, CS 4001 Ardon F- 45 075 Orléans Cedex 2 France Main researcher: Marie Anne Lelú-Walter Main goal: Epigenetic characterization of Pinus pinaster cultures with distinct embryogenic potential. This included analyses of global DNA methylation levels and mRNA accumulation. The duties included: degenerated primer design for candidate genes, molecular database search, use of bioinformatic tools; reception, storage and processing of samples (DNA extraction, DNA hydrolysis); measurement of global DNA methylation -by High Performane Liquid Chormatography (HPLC)-, PCR, Gel electrophoresis; DNA fragment purifying, cloning and sequencing; data analyses and evaluation, and report writing in English. - The role of epigenetics in long term somatic embryogenesis of conifers Visiting Scientist Contract (2006 Feb -2006 Oct ). *Natural Resources Canada, Canadian Forest Service (NRC-CFS), Laurentian Forestry Center, rue du P.E.P.S., 1055, Sainte-Foy G1V 4C7, 10380 Québec, Canada. Main researcher: Krystyna Klimaszewska ([email protected]) Main goal: Epigenetic and biochemical characterization of conifer cultures with distinct embryogenic potential (regarding genotype, age of culture, storing, type of somatic embryogenesis, treatment with demethylating agents). This included analyses of both global DNA methylation and polyamine levels. The duties included: use of bioinformatic tools; collecting of explants, tissue culture for somatic embryogenesis, storage and processing of samples (RNA and DNA extraction, DNA hydrolysis); measurement of global DNA methylation - by High Performance Performane Capillary Electrophoresis (HPCE)-, PCR, Gel electrophoresis; analysis of Methylation Sensitive Amplyfication Polymorphisms –MSAPs-, DNA and RNA quantifying, quantitative RT-PCR, analyses of free and bound polyamines by High Performance Liquid Chormatography (HPLC), data analyses and evaluation; review of literature; article writing and conference communication, both in English. - International INCO Project of the European Union UE-01-ICA4-CT-10063: Scaling-up plantain production and quality by Temporary Immersion Bioreactor (TIB)-technology: validation of this plant propagation procedure. Postdoctoral Contract of Formation of Research Staff (2002 Nov-2005 Sep). *Laboratory of Plant Physiology, Department of Biology of Organisms and Systems, University of Oviedo, Spain. Short stays in: *Corporación Bananera Nacional (CORBANA). Guápiles. Costa Rica, 2004 Ago 02-09. Sampling and Project meeting. *Centro Agronómico Tropical de Investigación y Enseñanza (CATIE). Turrialba. Costa Rica, 2004 Ago 10-15. DNA extraction and preparation of samples for transport. Participation in meetings of the Project * Ciego de Ávila, Cuba (2003) * Oviedo, Spain (2004) * Guápiles, Costa Rica (2004) Director: Prof. María Jesús Cañal ([email protected]). Goals: Detection of somaclonal variants and molecular characterization of field and micropropagated phenotypes of plantain, identification of genetic markers and improving of micropropagation methods stating the quality of the regenerants, specially regarding organogenic multiplication. The duties included: -Checking of genetic and epigenetic variability in macro and micropropagated Musa studding a) nuclear DNA contents, including ploidy levels -using flow cytometry-, b) genetic alterations using Ag staining and fluorescence-based fluorimetry, and c) quantitative changes of global genomic DNA methylation using HPCE after hydrolysis. -Quantifying of free and bound polyamine contents –by HPLC- in order to discuss a possible relationship with molecular variations; study of different tissues and different stages of micropropagation process using different culture conditions in both semisolid medium and temporary immersion bioreactor systems (BITs). -Validation of BIT-regenerated plants by evaluation of plant production rate and quality; study of different culture conditions (growth regulators, physical factors…) for allowing the optimization of the methodology, supported by histological observations. -Literature review; Diffusion of results; training and supervision of researchers and students; conference organizations and assistance to conferences and project international meetings, in both English and Spanish. Minor research collaborations - Departament of Functional Biology of the University of Oviedo: * Acid gastric secretion" and "Changes in the sexual behaviour of rat induced by propanolol adrenergic inhibition. (Ref.: Emilia Menéndez Abraham, Área of Phyisiología Animal). 1991 * Population Genetics of Trifolium repens (Ref.: M.A. Comendador, Area of Genetics). - IBP-UCLV, Santa Clara (Cuba) * Research on somatic embryogenesis of Coffea. Co-operation in the organization of meetings - Meeting of the Society for In Vitro Biology, Minneapolis (2006) - Reunión Proyecto Europeo, Oviedo (2004) - COST 843 Oviedo (2004) - BIOTEC 2004, Oviedo (2004) Training and supervision of researchers - Fernández O (2007) Somaclonal variation of Musa AAB clone ‘CEMSA ¾’: morphoagronomic descriptors, molecular markers and biochemical indicators. Bachelor Thesis. University of Oviedo. (Highest mark). Supervisors: Cañal MJ and Noceda C. - Pérez Suárez M (2006) Genomic DNA methylation and free polyamine contents as indicators of somatic embyogenic potencial in Pinus nigra Arn. Bachelor Thesis. University of Oviedo. (Highest mark). Supervisors: Rodríguez R and Noceda C. - Santamaría E (2006) Plant production of Musa AAB clon CEMSA ¾ by temporary immersion systems: validation of regenerants. Master Thesis. University of Oviedo. (Highest mark). Supervisors: Rodriguez R and Noceda C. - Santamaría E (2004) Plant production of Musa AAB clon CEMSA ¾ by organogenic micropropagation: validation of regenerants. Bachelor Thesis. University of Oviedo. (Highest mark). Supervisors: Cañal MJ and Noceda C. Teaching - “Introducción a la Fisiología Vegetal” and “Genética”, from the career de Ingeniería Agrícola y Biológica-, 2014, ESPOL, Guayaquil, Ecuador - Sciences and Humanities (High School level), including Mathematics, Physics, Chemistry, Biology and English. Olimpo Academy, Avilés, Spain (2008-2009). - Plants as biofactories: present or future? Program for Seniors of University of Oviedo (PUMUO), Spain (2004 and 2005) - Support in theoretical and practical teaching on Plant Physiology in the Biological Sciences university career. University of Oviedo (2002-2005) - Conference in a Ph.D. Program of the Department of Biology of Organisms and Systems. University of Oviedo, Spain (2005) - Teaching in the course “Expert in the Collection of Urban Solid Wastes" (300 lecture hours) (1994). Ayuntamiento de Avilés, Asturias (Spain) - Mathematics (High School level) (1990). LECI Academy, Gijón, Spain - Collaboration in the making (design, screenplay, filming and edition) of a didactical video on Environment (1990). Promoted by the Associated Students of Biology (EBA) youth association, which belonged to the Students of Asturias (EDA) federation, a member of the Youth Council of the Principado de Asturias, in collaboration with the Audiovisual Media Service of the University of Oviedo - Field teacher of Biology and Geology (High School level) EBA and Monte Naranco Institute. Arriondas, Asturias, Spain (1989). Into the environmental education Programme of Itineraries in the Nature as support to the High School teaching. - Others: Natural Sciences, Nutrition, Drawing, Biohemictry, Biostatistics, Genetics, Chemistry and Algebra of universitary studies. Technical/Commercial - Public Relationships (2002) Urbatel Marketing Directo, SL, Oviedo, Spain. - Enquirer for statistical researches (1995). Random (opinion, marketing and socio-economic studies), Madrid - Local Development Agent (1994-1995), into the Program "Attending the Cultural Change” (Spanish Federation of Counties and Provinces -FEMP-), financed by the European Union. Co-ordinator of the team elaborator of the Study on environmental conservation: "Planning for the extension of selective collection of urban solid wastes in the county of Avilés”, city Council of Avilés, Asturias, Spain. - Collaborations with ICONA (Spain) in works for environmental control (1985-1988). - Insurance seller (2002 Sep-Oct) PROFESSIONAL SPECIALTY AND INTERESTS Research lines Molecular/functional markers, somaclonal variation, genome changes, gene expression, DNA methylation, extracellular proteins, polyamines, tissue culture, somatic embryogenesis Research topics Somatic embryogenesis Organogenesis Plant ageing and reinvigoration Polyamines Peroxidases and extracellular proteins related with somatic embryogenesis Somaclonal variation Molecular markers Functional markers Epigenetics (DNA-methylation) Gene expression and morphogenetic control Genome changes and evolution Species: Daucus carota Oleas europaea Coffea spp. Hypericum perforatum Musa spp. Pinus spp. Picea spp. TECHNICAL AND PROFESSIONAL QUALIFICATIONS - Membership of Biologist Official College (COB, Spain) from 1990. - Pedagogical Aptitude Certificate (CAP) (1990) Institute of Educational Sciences (ICE), University of Oviedo, Spain. - Title of Projector-Installer of Sun Energy (1992). Centre of Solar Energy Studies (CENSOLAR), authorised by the Ministry of Education and Science, Spain. SKILLS Techniques and equipment (with all related software): Routine handled: Plant Tissue and Cell Suspensions Culture (Somatic Embryogenesis and Organogenic Micropropagation): Laminar Flow Chambers (1996-1998, 2002-2006) Bioreactors, Temporary Immersion Systems (TIB®), Automated Temporal Immersion Recipients (RITA®), cell-based screening techniques, etc. Growth chambers. Ultracentrifuges: 1998-1999, 2002-2006 Spectrophotometry Flow cytometry (Beckman Coulter’s Cytomics FC 500) (2003-2005) Extraction and purification of secondary metabolites, proteins and nucleic acids. Separation of polyamines (HPLC -Waters®:1998-2001, 2002-2005, nucleosides (HPCE -Waters®: 2002-2005, proteins (SDS-PAGE) and nucleic acids (electrophoresis in agarose gels) Protein identification: Immuno-analytical techniques Dot and Western blot. Genome and epigenome analyses: restriction endonucleases, PCR, nucleic acid cloning, sequencing and analysis, molecular markers (AFLPs -ABI Prism® 3100 Genetic Analyzer: 2005, MSAPs -Li-Cor®: 2006), analyses of global DNA methylation (HPCE -Waters®: 2002-2005; HPLC: 2009) Gene expression analysis: semiquantitative RT-PCR (2009) Occasionally handled, or training: Genome and epigenome analyses: chromosome walking (2011), Southern blotting (2012) Optical and transcription electronic (TEM-1993-1994) microcopy. Gene expression analysis: RT(q)-PCR (2006, 2011, 2012, 2013) Oxigraphy Project Management Skills Writing of scientific research proposals Designing and execution of projects Supervision of project teams Analysing of obtained information Writing of technical and scientific reports Languages - Spanish (mother language) - English: stances in USA (accumulated: 2 months), UK (accumulated: 3 months) and Canada (9 months): * Course by mailing with The English School (1985). * Couse and Certificate of the Stanton School of English (1992 Nov 11-1993 Jan 03). Level 4 (Higher intermediate: Oxford and Cambridge Preliminary) of 6. London. * Course in the Dundee College (24 hours) (1995 Jul 31- Aug 18). Advanced. Dundee, Scotland - Basic knowledge of French (stances in France): several courses in France. - Basic knowledge of Portuguese (stances in Portugal). - Intensive course on Finish Language and Culture (1993 Aug 02-15). Helsinki Computing - Course on mechanic design with AutoCAD (Computer Aided Design) applications (480 hours) (1991 Jan 10-Jul 19). National Institute for Employment (INEM). Oviedo, Spain. Scholarship of INEM. - Course on BASIC programming language (1985 Jan 01-May 31). Centre for Informatics Assessment and Instruction, Oviedo, Spain. Diploma (1985 May 31) - Operative systems (MS-DOS, WINDOWS), integrated packages, word processors, data bases, computer sheets, Internet. - Software applied to different analytical techniques: HPCE and HPLC (Waters©), DNAsequencing, DNA-fragment analysis, Li-Cor®, RT-PCR. - Bioinformatics: protein and genome data bases, degenerate and non-dgenerate primer design, multiple alignement. - Statistical applications (SPSS and its CHAID module; SigmaStat) - Statistical and experimental design knowledge and experience - EDUCATION - Ph.D. Biology (1991-2001) University of Oviedo, Spain. Thesis on Plant Biology. Program (1991-1993): "Oceanography and Biology of Aquatic Resources”. - M.Sc. Plant Biotechnology (1996-1999) Central University “Marta Abreu” of Las Villas, Cuba. Program in Institute of Plant Biotechnology. Scholarship of the Spanish Agency for International Cooperation (AECI) (Avenida de los Reyes Católicos, 4, Madrid, Spain). - Grade of Bachelor in Biological Sciences (1990) University of Oviedo, Spain. - Bachelor in Biological Sciences (speciality: Fundamental Biology) (1983-1989) University of Oviedo, Spain. Workshops/courses/only attended meetings Scientific/Technical - Bioveg (2007). Advanced Techniques Applied to Mass Clonal Propagation of Plants. May 711. Centro de Bioplantas, Ciego de Ávila. Cayo Coco (Cuba) - BioVeg (1997) International Workshop on Plant Biotechnology. Apr 2-5. Centro de Bioplantas, Ciego de Ávila (Cuba) - IV Coloquio internacional de Biotecnología de las Plantas (invited, 1996). Jun 23-26. Instituto de Biotecnología de las Plantas, Santa Clara (Cuba). - Courses on both Physics (National University for Distance Education –U.N.E.D.-, Spain 19941995) and Biochemistry (University of Oviedo, Spain, 2004-2005) university careers - Television and Video production (18 hours) (1994 Nov 14-19) Youth Association Rigel, Gijón, Spain. - Title of Projector-Installer of Sun Energy (1992). Centre of Solar Energy Studies (CENSOLAR), authorised by the Ministry of Education and Science, Spain. Financed by a partial grant of this institution - Food microbiology (25 hours) (1991). Official College of Veterinary of Asturias, Oviedo, Spain. - I Practical Course on “In vitro culture of Plant tissues” (68 hours) (1990 Jul 9-20) University Extension, University of Oviedo. - "Knowing the human brain” (14 hours) (1990). University Extension, University of Oviedo, Avilés, Asturias, Spain. - International course on Environmental Education (15 days) (1989 Jul 16-31) University Student Association of Extremadura (AUNEX). Hoyos, Cáceres, Spain. Burse for travelling of University of Oviedo, trough the Biology Students Association (EBA). Pedagogy - Course on Formation of Formers of “Expert in Cultural Change applied to the Separation and selective Collection of Urban Solid Wastes (180 hours) (1994 Aug 29- Sep 23). Program for the Cultural Change “University and County”. Coordinated by the Spanish Federation of Counties and Provinces (FEMP) Zaragoza, Spain. - I Journeys on Communication Media and Youth, with workshops of TV and video (1990 Oct 26). Assessor Council of the Spanish Radio and Television – RTVE- of Asturias and the Youth Council of the Principado de Asturias. Oviedo, Spain. - Pedagogical Aptitude Certificate (CAP) (1990 May 02) Institute of Educational Sciences (ICE), University of Oviedo, Spain. PUBLICATIONS INDEXED PUBLICATIONS Research articles - Noceda C, Vargas A, Roels S, Cejas I, Santamaría E, Escalona M, Debergh P, Rodríguez R, Sandoval J, Cañal MJ (2012) Field performance and (epi)genetic profile of plantain (Musa AAB) clone ‘CEMSA ¾’ plants micropropagated by temporary immersion systems. Sci Hortic 146: 65-75. doi 10.1016/j.scienta.2012.08.007. - Cejas I, Capote I, Aragón CE, Escalona M, Pina D, González J, Rodríguez R, Noceda C, Cañal MJ, Sandoval J, Roels S, Debergh P (2011) Optimizing protocol of plantain propagation cv. CEMSA 3/4 in Temporary Immersion Bioreactors. Agrociencia (Montevideo) 15(1):13-18. - Noceda C, Salaj T, Pérez M, Viejo M, Cañal MJ, Salaj J, Rodríguez R (2009) DNA demethylation and decrease on free polyamines is associated with the embryogenic capacity of Pinus nigra Arn. cell culture. Trees 23: 1285-1293. doi 10.1007/s00468-009-0370-8. - Klimaszewska K, Noceda C, Pelletier G, Label P, Rodriguez R, Lelu-Walter MA (2008) Biological characterization of young and aged embryogenic cultures of Pinus pinaster (Ait.) In Vitro Cell Dev-Pl 45 (1): 20-33. doi 10.1007/s11627-008-9158-6. - Hernández R, Ramírez T, Noa-Carrazana JC, Rodríguez-Fernández R, Cañal MJ, FloresEstévez N, Corujo M, Noceda C, Ventura J (2007) Generation of five new Musa hybrids with resistance to black Sigatoka and high yield. Amer J Agric & Biol Sci 2(2): 43-48. doi 10.3844/ajabssp.2007.43.48. - Hernández R, Rodríguez R, Ramírez T, Cañal MJ, Guillen D, Noceda C, Escalona M, Corujo M, Ventura J (2007) Genetic and morphoagronomic characterization of plantain variants of Musa AAB clone ´CEMSA ¾`. Journal of Food, Agriculture & Environment 5(1): 220-223. - Aragón C, Escalona M, Capote I, Pina D, Cejas I, Rodríguez R, Noceda C, Sandoval J, Roels S, Debergh P, González-Olmedo JL (2006) Metabolic importance of starch in the acclimation of plantain ‘CEMSA 3/4’ (AAB) plants. INFOMUSA 15 (1,2): 32-35. - Roels S, Noceda C, Escalona M, Sandoval J, Canal MJ, Rodriguez, Debergh P (2006) The effect of headspace renewal in a Temporary Immersion Bioreactor on plantain (Musa AAB) shoot proliferation and quality. Plant Cell Tiss Org Cult 84 (2): 155-163. doi 10.1007/s11240-0059013-y. - Roels S, Escalona M, Cejas I, Noceda C, Rodriguez R, Canal MJ, Sandoval J, Debergh P (2005) Optimization of plantain (Musa AAB) micropropagation by temporary immersion system. Plant Cell Tiss Org Cult 82 (1): 57-66. doi 10.1007/s11240-004-6746-y. - Noceda C, Quiala, E, Jiménez E, Rodríguez R, Cañal MJ, Gómez R, Barbón R, Capote A, Pérez N, de Feria M, Chávez M (2002) Proporciones diferenciales de poliaminas en explantes foliares y suspensiones celulares embriogénicas y no embriogénicas en Coffea canephora P. var. Robusta. Café Cacao 3(2): 39-41. - Noceda C, Sierra SG, Martínez JL (1997) Histopathology of UV-B irradiated brown trout (Salmo trutta L.) skin. Dis Aquat Org 31: 103-10. Reviews - Uribe-Moraga M, Cañal MJ, Noceda C, Ríos D, Fraga MF, Ferrando A, Altabella T, Tiburcio AF, Rodríguez R (2004) Polyamines in herbaceous and woody plants. Current Topics in Plant Biology 5: 53-62. Chapters in indexed books - Nogales A, Noceda C, Ragonezzi C, Cardoso H, Campos MD, Frederico AM, Sircar D, Kumar SR, Polidoros P, Peixe P, Arnhold-Schmitt B (in press) Functional marker development from AOX genes requires deep phenotyping and individualized diagnosis. Sub-chapter in Arnholdt-Schmitt B. From AOX diversity to functional marker development. Gupta KJ, Mur LAJ, Neelwarne B (eds.) Alternative respiratory pathways in higher plants. John Wiley & Sons, Inc. (pp. x-y) ISBN: 978-1-118-79046-5 https://sites.google.com/site/alternativerespiratorypathways/ - Noceda C, Svensson JT, Nogales A, Arnholdt-Schmitt B (in press) AOX gene diversity can affect DNA methylation and genome organization relevant for functional marker development. Subchapter in Arnholdt-Schmitt B. From AOX diversity to functional marker development. Gupta KJ, Mur LAJ, Neelwarne B (eds.) Alternative respiratory pathways in higher plants. John Wiley & Sons, Inc. (pp. x-y) ISBN: 978-1-118-79046-5 https://sites.google.com/site/alternativerespiratorypathways/ Conferences with abstracts in indexed books - Noceda C, Salaj T, Pérez M, Canal MJ, Salaj J, Rodriguez R (2007) DNA methylation status and free polyamine content in Pinus nigra embryogenic tissues with different maturation ability. Poster. VII International Symposium in the series “Recent Advances in Plant Biotechnology“. Jun 10-16. Plant Biotechnology: Impact on High Quality Plant Production. Book of abstracts: 81-82 (193 pp). Stará Lesná, High Tatras (Slovakian Republic). ISBN: 978-80-89088-51-5 (In Web of Science) NON-INDEXED PUBLICATIONS Chapters in books - Rodríguez R, Fernández-Fraga M, Pacheco JC, Berdasco M, Diego LB, Noceda C, Hasbun R, Valledor L, Hernández R, Cañal MJ (2004) Envejecimiento y cambio de fase: hacia la propagación de genotipos élite independientes de edad. In: Sánchez-Olate, Ríos-Leal D (eds) II Curso Internacional de Postgrado en Biotecnología Forestal. Desde el Microinjerto a la embriogénesis somática. 2004 Mar 08-11. Univ. de Concepción. Chile. pp.: 1-17 Conference Proceedings in books - Noceda C, Cañal MJ, Fraga MF, Escalona M, González-Olmedo J, Cejas I, Santamaría E, Hernández R, Sandoval J, Roels S, Debergh P, Gómez-Kosky R, Berdasco M, Ramírez T, Rodríguez R (2005) Participacion de las poliaminas en la morfogénesis vegetal. Oral communication and Poster. Bioveg 2005 Feb 7-11. In: Cabrales Hernández G, Martínez Montero ME, Santiesteban Toca C, Loyola Martínez O, Ortega Reyes Y, Romero Podio R (eds) Abstracts: 114 (116 pp). Proceedings: 909-914 (926 pp). Centro de Bioplantas, Ciego de Ávila (Cuba). ISBN: 959-16-0300-2. - Noceda C, Rodríguez R, Hernández R, Alonso M, Escalona M, González-Olmedo J, Cejas I, Sandoval J, Roels S, Debergh P, Ramírez T, Cañal MJ (2005) (Epi)genetic characterization of Musa regenerants. Oral communication. Bioveg 2005 Feb 7-11. In: Cabrales Hernández G, Martínez Montero ME, Santiesteban Toca C, Loyola Martínez O, Ortega Reyes Y, Romero Podio R (eds) Abstracts: 4 (116 pp). Proceedings: 13-20 (926 pp). Centro de Bioplantas, Ciego de Ávila (Cuba). ISBN: 959-16-0300-2 - Rodríguez R, Diego LB, Berdasco M, Fraga MF, Risueño C, Testillano PS, Noceda C, Santamaría E, Hasbun R, Valledor L, Cañal MJ (2005) Impacto de la maduraciónenvejecimiento en la clonación de especies agroforestales: sistemas de multiplicación, competencia-expresión de genes candidatos y validación de los regenerantes. Invited plenary conference. Bioveg 2005 Feb 7-11. In: Cabrales Hernández G, Martínez Montero ME, Santiesteban Toca C, Loyola Martínez O, Ortega Reyes Y, Romero Podio R (eds) Abstracts: 23 (116 pp). Poceedings: 159-164 (926 pp): Centro de Bioplantas, Ciego de Ávila (Cuba). ISBN: 959-16-0300-2. - Cejas I, Capote I, Escalona M, Noceda C, Rodríguez R, Cañal MJ, Roels S, Sandoval J, Debergh P (2005) Protocolo para la proliferación de plátano Musa AAB (CEMSA ¾) con el empleo de meta-topolina en Biorreactores de Inmersión Temporal. Oral communication. Bioveg 2005 Feb 7-11. In: Cabrales Hernández G, Martínez Montero ME, Santiesteban Toca C, Loyola Martínez O, Ortega Reyes Y, Romero Podio R (eds) Abstracts: 3 (116 pp). Proceedings: 7-13 (926 pp) Centro de Bioplantas, Ciego de Ávila (Cuba). ISBN: 959-160300-2. - Rodríguez R, Fraga M, Diego L, Berdasco M, Hasbun R, Noceda C, Mendivil C, Salajová T Radojevic L, Escalona M, Roels S, Debergh P, Cañal MJ (2003) Micropropagation and Physiological aspects. Invited plenary conference. In: Espinel S, Barredo I, Ritter E (eds) Sustainable Forestry, Wood Products and Biotechnology. DFA-AFA Press, Vitoria-Gasteiz, Spain International Scientific Congress BIOFOR´02 Nov 11-14. Arabako Foru Aldundia. Depósito legal: VI-552/03. 1, 15-30. Vitoria (España). OTHER MEETINGS With abstracts - Noceda C, Flores J, Santos E, Burbano R, Peralta E, Sosa D (2014) Estrategia para el estudio de las alteraciones moleculares que causan la variación somaclonal en banano. VI Simposio de Mejoramiento y Conservación de Recursos Fitogenéticos. XIX Congreso Internacional del INCA (Cuba) - Noceda C, Porfírio S, Santos-Macedo E, Peixe A, Birgit Arnholdt-Schmitt B (2014) Papel del estrés en el enraizamiento adventicio de olivo. IV Simposio de Ecofisiología Vegetal. XIX Congreso Internacional del INCA (Cuba) - Noceda C, Porfirio S, Santos-Macedo E, Peixe A, Arnhold-Schmitt A (2014) Gestión del estrés oxidativo por la oxidasa alternativa durante la inducción del enraizamiento adventicio en olivo. Memorias del 2º Simposio de Fisiología Vegetal. Archivos Académicos de la Universidad San Francisco (Ecuador). 1:10. ISBN: 978-9978-68-069-8 - Noceda C (2014) Epigenetic reprogramming during the induction of somatic embryogenesis. Cases in Pinaceae. Presentación oral. II Congreso Internacional de Biotecnología y Biodiversidad (CIBBII). Abstracts. Guayaquil, Ecuador. - Noceda C, Flores J, Santos E, Cevallos JM, Manzano P, Peralta EL (2014) Principales resultados sobre la producción de material de siembra de banano y plátano: cultivo de tejidos, saneamiento y variación somaclonal. Conferencia invitada. II Congreso Internacional de Biotecnología y Biodiversidad (CIBBII). Abstracts. Guayaquil, Ecuador. - Noceda C, Santos-Macedo E, Peixe A, Arnholdt-Schmitt B (2013). Increased alternative oxidase (AOX) expression early during adventitious root induction in shoot cuttings of Olea europaea L. Olomouc Biotech 2013. Plant Biotechnology: Green for Good II. June 17-21. Abstracts: 88. Centre of the Region Haná for Biotechnological and Agricultural Research. Olomouc, Czech Republic. - Rodríguez R, Cañal MJ, Valledor L, Hasbún R, Noceda C, Santamaría E, Meijón M, Feito I, Rodríguez JL, Testillano P, Risueño C, Berdasco M, Fraga M (2006) Physiological and epigenetic traits during maturation of agroforesntry species. Invited conference. COST E-28 WG2. Meeting on Functional genomics of tree maturation and reproduction. Feb 2-3. Abstracts: 17-18. Dpto. Biología Vegetal. Universidad de Alcalá. Alcalá de Henares, Madrid (España) - Klimaszewska K, Noceda C, Pelletier G, Label P, Rodríguez R, Lelu-Walter MA (2006) Agedependent biological characteristics of embryonal mass of maritime pine in relations to the embryogenic potential. Poster. 2006 Meeting of the Society for In Vitro Biology. Jun 3-7. Late abstracts: 8 (12 pp). Minneapolis (USA) - Noceda C, Rodríguez R, Cañal MJ, Alonso M, Hernández R, Escalona M, González-Olmedo J, Cejas I, Sandoval J, Roels S, Debergh P, Ramírez T (2004) (Epi)genetic certification of Musa regenerants from BIT® systems. Invited conference. COST 843. 2004 Nov 18-21. Heraklio (Greece). - Escalona M, González-Olmedo J, Cejas I, Aragón C, Capote I, Rodríguez R2, Cañal MJ, Sandoval J, Hernández R, Noceda C, Alonso-Guervós M, Santamaría Fernández E, Roels S, Debergh P (2004) Scaling-up plant production by temporary immersion and quality of regenerants. Invited conference (Co-organizator). COST 843. 2004. Abstracts: 23. Oviedo (Spain) - Cejas I, Escalona M, Capote I, Noceda C, Rodriguez R, Canal MJ, Roels S, Debergh P, Sandoval (2004) Protocol for proliferation of the plantain (Musa AAB) clon 'CEMSA 3/4' in temporary immersion bioreactor. Oral communication. XVI reunión internacional ACORBAT. Sept 26-Oct 01. In: Orozco Romero J, Orozco-Santos M, Zapata-Altaminaro R, VizcaínoGuajardo A, Morfin-Valencia A, Hernández-Bautista JA (eds) Publicación especial. Short reports: 185 (280 pp). Oaxaca (Mexico). - Noceda C, Hernández R, Alonso-Guervós M, Santamaría E, Escalona M, González-Olmedo J, Cejas I, Aragón C, Capote I, Ramírez T, Sandoval J, Roels S, Debergh P, Rodríguez R, Cañal MJ (2004) Producción de plantas de Musa AAB clon CEMSA ¾ mediante escalado en biorreactores de inmersión temporal. Calidad de los regenerantes. Poster (Co-organizator). BIOTEC 2004 Jul 19-23. Abstracts: 429 (594 pp) Oviedo (Spain). ISBN: 84-609-1771-1. DL: AS-2521/2004 - Noceda C, Cejas I, Fernández P, Ramírez T, Hernández R, Gómez Kosky R, Cañal MJ, Escalona M, Rodríguez R (2003) Definición de marcadores moleculares y métodos para incrementar el rendimiento de organogénesis y embriogénesis somática de Musa spp. empleando inmersión temporal (BIT®). Oral communication. Reunión SECIVTV 2003 Sept 16-20. Abstracts: 191. Palma de Mallorca (Spain) - Rodríguez R, Hasbún R, Cañal M, Fraga M, Noceda C, Berdasco M, Diego L (2003). Molecular Bases of Plant Ageing and Reinvigoration in Agroforestry Species. Invited plenary conference. International Workshop on Plant Biotechnology Bioveg 2003 Apr 14-19. In: Santos M, Cabrales G (eds) Plant Biotechnology and Sustainable Agriculture. Abstracts: 5-6 (131 pp). Centro de Bioplantas, Ciego de Ávila (Cuba) - Noceda C, Cejas I, Fernández P, Roels S, Bernal B, Sandoval J, Hernández R, Rodríguez R, Escalona M, Debergh P, Cañal MJ (2003) Genetic, epigenetic and phenotypic variations along in vitro vegetative regeneration of Musa AAB clone CEMSA ¾. Oral communication. International Workshop on Plant Biotechnology Bioveg 2003 Apr 14-19. In: Santos M, Cabrales G (eds) Plant Biotechnology and Sustainable Agriculture. Abstracts: 29-30 (131 pp). Centro de Bioplantas, Ciego de Ávila (Cuba) - Noceda C, Gómez Kosky R, Rodríguez R, Reyes M, Jiménez E, Cañal MJ, Rodríguez R (2003) Extracellular proteins serologically analogue to PE32 and polyamines as markers in somatic embryogenesis process in Musa spp.: induction, somatic embryo formation, maturation, germination and embryogenic competency. Oral communication and Poster. International Workshop on Plant Biotechnology Bioveg 2003 Apr 14-19. In: Santos M, Cabrales G (eds) Plant Biotechnology and Sustainable Agriculture. Abstracts: 12-14 (131 pp). Centro de Bioplantas, Ciego de Ávila (Cuba) - Noceda C, Cejas I, Fernández P, Ramírez T, Hernández R, Gómez R, Escalona M, Cañal MJ, Rodríguez R (2003) Hacia la certificación molecular y epigenética de microplantas de Musa spp. producidas en sistemas de inmersión temporal BIT®. Poster. V Reunión de la Sociedad Española de cultivo in vitro de Tejidos Vegetales (SECIVTV) Jun 29-Jul 2. Abstracts: 79 (104). Pamplona (Spain) - Rodríguez R, Esaclona M, Rodríguez M, Gómez R, Reyes M, Jiménez E, Roels S, Debergh P, Castresana C, Lauria M, Lund G, Ritter E, Espinel S, Aragonés A, García I, Telleira A, Harvengt L, Risueño MC, Testilano P, Tiburcio A, Altabella T, Ríos D, Sánchez M, Radojevic L, Berdasco M, Diego LB, Hasbun R, Noceda C, Bernardo S, Valledor L, Fraga M, Cañal MJ (2002) Gene expression and epigenetic modifications related to maturation and phasechange in Pinus radiata D. Don. Invited conference. International Scientific Congress BIOFOR´02 Nov 11-14. Sustainable Forestry, Wood Products and Biotechnology. Vitoria (Spain). - Noceda C, Rodríguez M, Gómez Kosky R, Reyes M, Jiménez E, Fernández Fraga M, Cañal MJ, Rodríguez R (2001) Participación de proteínas serológicamente análogas a PE32 en la embriogénesis somática de Musa. Oral communication. XIV Reunión de la Sociedad Española de Fisiología Vegetal y VII Congreso Hispano-Luso. Sep 27. In: Álvarez Tinaut MC, Paredes Maña MA, Espinosa Borreguero F (eds) Resúmenes: 248 (367 pp). Badajoz (Spain) ISBN: 84-7723-455-8. DL: BA-488-2001 - Noceda C, Grau R, Reyes M, y Gómez-Kosky R (1999) Influencia de diversos factores sobre la embriogénesis somática de alta frecuencia en explantes florales masculinos de Musa cvs. Gran Enano (AAA) y FHIA-18 (AAAB). Oral communication. V Coloquio Internacional de Biotecnología Vegetal 1999 Jun 16-19. In: Alvarado Capó Y, Gregorio Chaviano O (eds) Libro de Reportes Cortos. pp 125-127 (266 pp). Instituto de Biotecnología de las Plantas. Santa Clara. (Cuba). ISBN: 959-7122-03-0 - Noceda C, Jiménez E, Barbón R, Capote A, Quiala E, Chávez M, Pérez N, Pérez JC (1998) Estudio del potencial embriogénico en diferentes explantes foliares de Coffea canephora P. cv. Robusta. Poster. III Latin-American Meeting on Plant Biotechnology FAO-REDBIO 1998 Jun 1-5. Abstracts. 19-20 (516 pp). Havana (Cuba) - Sierra SG, Noceda C, Herrero P, Martínez JL (1997) Sunburn lesions in salmonid skin experimentally irradiated with ultraviolet-B Poster. VIII international Conference of European Association of Fish Pathologists (EAFP). Abstracts: P-023. Edinbourgh, Scotland (UK) -Sierra SG, Noceda C, Martínez JL (1996) Irradiaciones experimentales de truchas con UV-B. Efectos tegumentarios. Poster. I Reunión Nacional de Inmunología y Patología de Peces. Abstracts: P1. University of Extremadura, Badajoz (Spain) Without publication - Noceda C (2014) Epigenética: cómo el ambiente modifica la expresión de los genes. Conferencia invitada. Semana Verde, UEES 2014: Jornadas Ambientales. Universidad Estatal del Espíritu Santo, Guayaquil, Ecuador. - Noceda C (2014) Uso de tecnologías OMICAS para el desarrollo de la biotecnología microbiana e industrial: Introducción a las tecnologías OMICAS, aplicaciones biotecnológicas para el biodescubrimiento a partir de microorganismo y su uso en la industria. Conferencia invitada. Taller “Bioprospección y metagenómica microbiana. Avances de los estudios moleculares en banano”. Universidad de Las Amáricas, Quito, Ecuador. - Noceda C (2014) Investigaciones del CIBE en Cultivo de tejidos y biología molecular. Taller “Bioprospección y metagenómica microbiana. Avances de los estudios moleculares en banano”. Conferencia invitada. Universidad de Las Amáricas, Quito, Ecuador. - Noceda C (2014) Investigaciones del CIBE en Bioproductos y Fitopatología. Conferencia invitada. Taller “Bioprospección y metagenómica microbiana. Avances de los estudios moleculares enbanano”. Universidad de Las Amáricas, Quito, Ecuador. - Peixe A, Noceda C, Porfírio S (2013) Procurando compreender a dificuldade de enraizamento de algumas variedades de oliveira (Olea europaea L.). Oral communication. Workshop “Investigação em Olivicultura e Azeite –Resultados e Aplicações”. June 27-28. Pólo da Mitra, University of Évora, Portugal. - Noceda C (2001) Optimization of somatic embryogenesis in Musa cultivars and involvement of polyamines and extracellular proteins. Invited conference. 22 Nov. Lab. Of Tropical Crop Improvement. KU Leuven. - Noceda C (1996) Residuos sólidos urbanos. I Taller Nacional de Ecología y Medio Ambiente. PROECO 1996 Feb 29- Mar 01. Instituto de Biotecnología de las Plantas, Santa Clara (Cuba). THESES/DISSERTATIONS - Noceda C (2001) Optimization of somatic embryogenesis in Musa cultivars and involvement of polyamines and extracellular proteins. PhD thesis. University of Oviedo, Spain. Cum laude (highest distinction). Supervisors: Prof. María J Cañal (University of Oviedo), Dr. Rafael Gómez-Kosky, R (Insitute of Plant Biotechnology, Central University of Las Villas, Cuba). - Noceda C (1999) Influence of different factors on somatic embryogenesis in banana (Musa spp.). Biochemical characterization of the process. MSc thesis. Central University of Las Villas, Cuba. Excellent (highest distinction) Supervisors: Dr. Rafael Gómez-Kosky (Insitute of Plant Biotechnology, Central University of Las Villas), MSc Mayra Rodríguez (National Centre of Scientific Researches, Havana). - Noceda C (1994) Hystopathological effects of UV-B radiation in the epidermis of trout (Salmo trutta L) Department of Biology of Organisms and Systems, University of Oviedo, Spain. 9 credits (highest distinction). Supervisor: Prof. Juan L Martínez (Univesity of Oviedo)
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